[Bioperl-l] retrieval of PRELIMINARY uniprot sequences using Bio::Registry fails
Brian Osborne
osborne1 at optonline.net
Tue Sep 5 15:06:27 UTC 2006
Daniel,
Well, if you can isolate the bug please add it to bugzilla.
Brian O.
On 9/5/06 5:57 AM, "Daniel Lang" <daniel.lang at biologie.uni-freiburg.de>
wrote:
> Hi Brian,
>
> sorry for the belated response!
> I've compiled you a set of 100 PRELIMINARY entries from the latest
> uniprot_trembl release. I've tried to reproduce the bug using only these
> as input to build an index, but (sadly) all of them can be retrieved
> using the latest checkout:-(
> Maybe its not connected to these entries after all, but the size or some
> other feature of the uniprot distribution?
> I now could make it work using the 1.5.1 release.
>
> Originally, I've built the index using flat protocol, when I try bdb and
> bioperl-live even more problems occur:
>
> bp_bioflat_index.pl --dbname sw -i bdb -f swiss -l . -c uniprot_sprot.dat
>
> ------------- EXCEPTION -------------
> MSG: The lineage 'Eukaryota, Metazoa, Chordata, Craniata, Vertebrata,
> Euteleostomi, Amphibia, Batrachia, Anura, Mesobatrachia, Pipoidea,
> Pipidae, Xenopodinae, Xenopus, Silurana, Xenopus, tropicalis' had two
> non-consecutive nodes with the same name. Can't cope!
> STACK Bio::DB::Taxonomy::list::add_lineage
> /home/lang/bioperl/bioperl-live/Bio/DB/Taxonomy/list.pm:163
> STACK Bio::DB::Taxonomy::list::new
> /home/lang/bioperl/bioperl-live/Bio/DB/Taxonomy/list.pm:100
> STACK Bio::DB::Taxonomy::new
> /home/lang/bioperl/bioperl-live/Bio/DB/Taxonomy.pm:106
> STACK Bio::Species::classification
> /home/lang/bioperl/bioperl-live/Bio/Species.pm:171
> STACK Bio::SeqIO::swiss::_read_swissprot_Species
> /home/lang/bioperl/bioperl-live/Bio/SeqIO/swiss.pm:1049
> STACK Bio::SeqIO::swiss::next_seq
> /home/lang/bioperl/bioperl-live/Bio/SeqIO/swiss.pm:240
> STACK Bio::DB::Flat::parse_one_record
> /home/lang/bioperl/bioperl-live/Bio/DB/Flat.pm:333
> STACK Bio::DB::Flat::BDB::_index_file
> /home/lang/bioperl/bioperl-live/Bio/DB/Flat/BDB.pm:235
> STACK Bio::DB::Flat::BDB::build_index
> /home/lang/bioperl/bioperl-live/Bio/DB/Flat/BDB.pm:218
> STACK toplevel
> /share/apps/bioperl/bioperl-live/scripts_temp/bp_bioflat_index.pl:113
>
> But I think this is connected to the new changes to taxonomy handling in
> Bio::Taxon...
> I'm unsure wether to submit this separately, but I could also provide an
> example of such a swissprot entry that causes this error.
>
> Thanks, again.
>
> Daniel
>
> Brian Osborne wrote:
>> Daniel,
>>
>> Bug, presumably in SeqIO/swiss.pm. Can you send me a small file with such a
>> PRELIMINARY entry?
>>
>> Brian O.
>>
>>
>> On 9/1/06 6:11 AM, "Daniel Lang" <daniel.lang at biologie.uni-freiburg.de>
>> wrote:
>>
>>> Hi,
>>>
>>> when using Bio::Registry (bioperl-live) to fetch uniprot entries from
>>> local indexed uniprot *.dats, I had to realize that several entries
>>> could not be retrieved despite the fact that they are present in the
>>> files! A closer look reveals that they are of status PRELIMINARY:
>>>
>>> uniprot_trembl.dat:ID Q16EZ1_AEDAE PRELIMINARY; PRT; 222 AA.
>>>
>>> I don't "grep" PRELIMINARY anywhere in my cvs checkout..
>>> I also can't retrieve the sequences from the online database defined as
>>> follows:
>>> [swissprot_ebi]
>>> protocol=biofetch
>>> location=http://www.ebi.ac.uk/cgi-bin/dbfetch
>>> dbname=swall
>>>
>>> Is this a bug or a feature? If its a feature, how can I bypass it?
>>>
>>> Thanks in advance,
>>> Daniel
>>
>>
>
>
>
> ID Q50214_METMT PRELIMINARY; PRT; 163 AA.
> AC Q50214;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 25.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS Methanococcoides methylutens.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanococcoides.
> OX NCBI_TaxID=2226;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=96174929; PubMed=8590683;
> RA Springer E., Sachs M.S., Woese C.R., Boone D.R.;
> RT "Partial gene sequences for the A subunit of methyl-coenzyme M
> RT reductase (mcrI) as a phylogenetic tool for Methanosarcinaceae.";
> RL Int. J. Syst. Bacteriol. 45:554-559(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U22235; AAC43410.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q50214; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17548 MW; 9E1945AD201B2C68 CRC64;
> GSYMSGGVGF TQYATAAYTN NILDDNLYYN VDYINDKYDG AANKGTDNKV KATMDVVKDI
> ATESTIYGLE NYEKYPTALE DHFGGSQRAT VLSAAAGSAT ALATGNGNAG LSAWYLSMYL
> HKEAHGRLGF FGFDLQDQCG ATNVFSFQSD EGLPVELRGP NYP
> //
>
> ID Q8NKL4_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q8NKL4;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Galand P.E., Saarnio S., Fritze H., Yrjala K.;
> RT "Depth related diversity of methanogen Archaea in Finnish oligotrophic
> RT fen.";
> RL FEMS Microbiol. Ecol. 42:441-449(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ489768; CAD33991.2; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q8NKL4; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25658 MW; 7FC48B771D61AC25 CRC64;
> FIAAYNMCAG EAAVADLAFA AKHASLVEMA NMLPARRARG PNEPGGLSFG FMADMVQTDR
> IYPDDPVRSP LEVVAAGCML YDQIWLGSYM SGGVGFTQYA TAAYTDNILD DYSYYGNDYA
> KKYGANGKAP KTMDVVNDIA TEVTLYGIEQ YEKYPTTLED HFGGSQRATV LAAASGVAAA
> IATGNSNAGL SAWYLSMLLH KDAWGRLGFY GYDLQDQCGS TNVFSVRSDE GSPDELRGA
> //
>
> ID O93734_9EURY PRELIMINARY; PRT; 330 AA.
> AC O93734;
> DT 01-MAY-1999, integrated into UniProtKB/TrEMBL.
> DT 01-MAY-1999, sequence version 1.
> DT 30-MAY-2006, entry version 22.
> DE F420-dependent alcohol dehydrogenase (Fragment).
> GN Name=adf;
> OS Methanoculleus thermophilus.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;
> OC Methanomicrobiaceae; Methanoculleus.
> OX NCBI_TaxID=2200;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Berk H., Thauer R.K.;
> RL Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases.
> RN [2]
> RP X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
> RX PubMed=15016352; DOI=10.1016/j.str.2004.02.010;
> RA Aufhammer S.W., Warkentin E., Berk H., Shima S., Thauer R.K.,
> RA Ermler U.;
> RT "Coenzyme binding in F420-dependent secondary alcohol dehydrogenase, a
> RT member of the bacterial luciferase family.";
> RL Structure 12:361-370(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; Y18729; CAA77275.1; -; Genomic_DNA.
> DR PDB; 1RHC; X-ray; A=1-330.
> DR InterPro; IPR011251; Luciferase_like.
> DR Pfam; PF00296; Bac_luciferase; 1.
> FT NON_TER 330 330
> SQ SEQUENCE 330 AA; 37158 MW; CD1528E3B0AF11EB CRC64;
> MKTQIGYFAS LEQYRPMDAL EQAIRAEKVG FDSVWVDDHF HPWYHDNAQS AQAWAWMGAA
> LQATKKVFIS TCITCPIMRY NPAIVAQTFA TLRQMYPGRV GVAVGAGEAM NEVPVTGEWP
> SVPVRQDMTV EAVKVMRMLW ESDKPVTFKG DYFTLDKAFL YTKPDDEVPL YFSGMGPKGA
> KLAGMYGDHL MTVAAAPSTL KNVTIPKFEE GAREAGKDPS KMEHAMLIWY SVDPDYDKAV
> EALRFWAGCL VPSMFKYKVY DPKEVQLHAN LVHCDTIKEN YMCATDAEEM IKEIERFKEA
> GINHFCLGNS SPDVNFGIDI FKEVIPAVRD
> //
>
> ID Q50215_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q50215;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 25.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS Methanohalophilus mahii.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanohalophilus.
> OX NCBI_TaxID=2176;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=96174929; PubMed=8590683;
> RA Springer E., Sachs M.S., Woese C.R., Boone D.R.;
> RT "Partial gene sequences for the A subunit of methyl-coenzyme M
> RT reductase (mcrI) as a phylogenetic tool for Methanosarcinaceae.";
> RL Int. J. Syst. Bacteriol. 45:554-559(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U22237; AAC43411.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q50215; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17617 MW; 764122F547B7EDD7 CRC64;
> GSYMSGGVGF TQYSTAAYTN NILDDNLYYD VEYINDKYDG AAEKGIDNKV APSMDVIKDI
> ATESTLYGLE NYEKYPVALE DHFGGSQRAT VLSAAAGSAG SLATGNANAG LSAWYLCMYL
> HKEGHGRLGF FGFDLQDQCG ATNTFSYQSD EGLPHELRGP NYP
> //
>
> ID Q9C4G1_9EURY PRELIMINARY; PRT; 157 AA.
> AC Q9C4G1;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 17.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-MCR47.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosaetaceae; environmental samples.
> OX NCBI_TaxID=143078;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313850; AAK16880.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q9C4G1; 1-157.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 157 157
> SQ SEQUENCE 157 AA; 16858 MW; 6A87301935FB48DF CRC64;
> GSYMSGGVGF TQYATAAYTN DVLDDFCYYG VDFANDKFGG LAKAPQTLDV AKELGTEVTL
> YGMEQYESFP TLLEDHFGGS QRASVLAAAS GITAAIASGH SQVGLAAWYL SMLLHKEGWG
> RLGFFGYDLQ DQCGPTNVFS YQSDEGNPVE LRGANYP
> //
>
> ID Q59578_METTF PRELIMINARY; PRT; 569 AA.
> AC Q59578; O08492; P97184;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 28.
> DE Tungsten formylmethanofuran dehydrogenase (EC 1.2.99.5).
> GN Name=fwdA;
> OS Methanobacterium thermoformicicum.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanothermobacter.
> OX NCBI_TaxID=145262;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=Marburg/DSM 2133;
> RX MEDLINE=96163477; PubMed=8575452;
> RA Hochheimer A., Schmitz R.A., Thauer R.K., Hedderich R.;
> RT "The tungsten formylmethanofuran dehydrogenase from Methanobacterium
> RT thermoautotrophicum contains sequence motifs characteristic for
> RT enzymes containing molybdopterin dinucleotide.";
> RL Eur. J. Biochem. 234:910-920(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; X87970; CAA61213.1; -; Genomic_DNA.
> DR PIR; S63545; S57456.
> DR GO; GO:0018493; F:formylmethanofuran dehydrogenase activity; IEA.
> DR GO; GO:0016491; F:oxidoreductase activity; IEA.
> DR InterPro; IPR013108; Amidohydro_3.
> DR InterPro; IPR012027; FwdA.
> DR InterPro; IPR011059; Metal-dep_hydro_comp.
> DR Pfam; PF07969; Amidohydro_3; 1.
> DR PIRSF; PIRSF006453; FwdA; 1.
> KW Oxidoreductase.
> SQ SEQUENCE 569 AA; 62916 MW; 6002F909C6458F99 CRC64;
> MEYIIKNGFV YCPLNNVDGE KMDICLRDGK IVESVSDSAK VIDASGKIVM PGGVDPHSHI
> AGAKVNVGRM YRPEDSRRDA EKFKAGRAGS GFSVPSTFMT GYRYAQMGYT TAMEAAMPPL
> LARHTHEEFH DTPIIDHAAY PLFGNNWFVM EYLKEGDVDA CAAYASWLLK ATKGYTIKIV
> NPAGTEAWGW GGNVHGIHDP APYFDITPAE IIKGLAEVNE KLQLPHSIHL HCNDLGHPGN
> YETTLASFDV PKNIKANPAT GERDTVLYAT HVQFHSYGGT TWRDFVSEAP KIADYVNKND
> HIVIDVGQIT LDETTTMTAD GPMEYDLHSL NGLKWANCDV ELETGSGVVP FIYSARAPVP
> AVQWAIGMEL FLLIDDPAKV CLTTDSPNAG PFTRYPRVIA WLMSNKYRMN LIEGELHKWA
> QRKSTIATVD REYTFSEIAQ ITRSTSAKVL GLSETKGHLG VGADADIAVY NINPETIDPS
> VDYMAIEEGF SRAAYVLKDG EIVVKDGEVV ASPHGRTYWV DTRVDESTYN EVLAKVESKF
> KQYYSVNFAN YPVQDEYLPK SAPVKGVML
> //
>
> ID Q48921_METBU PRELIMINARY; PRT; 163 AA.
> AC Q48921;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 25.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS Methanococcoides burtonii.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanococcoides.
> OX NCBI_TaxID=29291;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM 6242;
> RX MEDLINE=96174929; PubMed=8590683;
> RA Springer E., Sachs M.S., Woese C.R., Boone D.R.;
> RT "Partial gene sequences for the A subunit of methyl-coenzyme M
> RT reductase (mcrI) as a phylogenetic tool for Methanosarcinaceae.";
> RL Int. J. Syst. Bacteriol. 45:554-559(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U22234; AAC43406.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q48921; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17494 MW; D1B83159FB0DA521 CRC64;
> GSYMSGGVGF TQYATAAYTN NILDDNLYYN VDYINDKYDG AANKGADNKV KATMDVVKDI
> ATESTIYGIE NYEKYPTALE DHFGGSQRAT VLSAAAGSAT ALATGNGNAG LSGWYLSMYL
> HKEALGRLGF FGFDLQDQCG ATNVFSFQSD EGLPLELRGP NYP
> //
>
> ID Q9C4H3_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q9C4H3;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 16.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-MCR34.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; environmental samples.
> OX NCBI_TaxID=143058;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313838; AAK16868.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q9C4H3; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17533 MW; F881F49FA3B2AC71 CRC64;
> GSYMSGGVGF TQYATAAYTD DILDNNVYYD VDYINDKYNG AANVGKDNKV KASLDVVKDI
> ATESTLYGIE TYEKFPTALE DHFGGSQRAT VLAAAAGVAC SLATANANAG LSGWYLSMYL
> HKEAWGRLGF FGYDLQDQCG ATNVLSYQGD EGLPDELRGP NYP
> //
>
> ID Q9C4T7_9ARCH PRELIMINARY; PRT; 148 AA.
> AC Q9C4T7;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 16.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS uncultured archaeon 94D.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=140222;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Hougaard E., Westermann P.;
> RL Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF268650; AAK07761.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q9C4T7; 1-148.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 148 148
> SQ SEQUENCE 148 AA; 16014 MW; 8FE4799E15A3F012 CRC64;
> TQYATAAYTD DILDNNVYYN VDYINDKYNG AANVGTDNKV KATLDVVKDI ATESTLYGIE
> TYEKFPTALE DHFGGSQRAT VLAAAAGVAT ALATANANAG LSGWYLSMYL HKEAWGRLGF
> FGFDLQDQCG ATNVLSYQGD EGLPDELR
> //
>
> ID Q9C4U9_9ARCH PRELIMINARY; PRT; 149 AA.
> AC Q9C4U9;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 15.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS uncultured archaeon 22C.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=140195;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Hougaard E., Westermann P.;
> RL Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF268623; AAK07749.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q9C4U9; 1-149.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 149 149
> SQ SEQUENCE 149 AA; 16054 MW; 96C1717B04EB559E CRC64;
> YMSGGVGFTQ YATAAYTNDV LDDFSYYGVD YANDKFGGFA KAPATIDVAK ELATEVTLYG
> IEQYEAFPTL LEDHFGGSQR AAVLAAASGI TSAIATGHSQ IGLAGWYLSM LLHKEAWGRL
> GFFGYDLQDQ CGPTNVFSYQ SDEGNPLEL
> //
>
> ID Q50386_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q50386;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 25.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS Methanohalophilus.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae.
> OX NCBI_TaxID=2175;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=HCM6;
> RX MEDLINE=96174929; PubMed=8590683;
> RA Springer E., Sachs M.S., Woese C.R., Boone D.R.;
> RT "Partial gene sequences for the A subunit of methyl-coenzyme M
> RT reductase (mcrI) as a phylogenetic tool for Methanosarcinaceae.";
> RL Int. J. Syst. Bacteriol. 45:554-559(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U22255; AAC43422.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q50386; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17595 MW; FD6122A402A2F226 CRC64;
> GSYMSGGVGF TQYSTAAYTN NILDDNLYYD VEYINDKYDG AADKGIDNKV APSMDVIKDI
> ATESTLYGLE NYEKYPVALE DHFGGSQRAT VLSAAAGSAG SLATGNANAG LSAWYLCMYL
> IKEGHGRLGF FGYDLQDQCG ATNTFSYQSD EGLPHELRGP NYP
> //
>
> ID Q977Q9_9CREN PRELIMINARY; PRT; 194 AA.
> AC Q977Q9;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Uncharacterized protein.
> OS uncultured crenarchaeote 4B7.
> OC Archaea; Crenarchaeota; Thermoprotei; marine archaeal group 1;
> OC environmental samples.
> OX NCBI_TaxID=44557;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21633832; PubMed=11772643; DOI=10.1128/AEM.68.1.335-345.2002;
> RA Beja O., Koonin E.V., Aravind L., Taylor L.T., Seitz H., Stein J.L.,
> RA Bensen D.C., Feldman R.A., Swanson R.V., DeLong E.F.;
> RT "Comparative genomic analysis of archaeal genotypic variants in a
> RT single population and in two different oceanic provinces.";
> RL Appl. Environ. Microbiol. 68:335-345(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U40238; AAK66811.1; -; Genomic_DNA.
> SQ SEQUENCE 194 AA; 21665 MW; 0B0E1876DB9B074E CRC64;
> MNYKIPSDAM VGKYTVVADT HFGQIEKSFF VINDFDVVNS VPSSEPSSKV SKIIEKFNRI
> AGNEISITLD EKSTVESTLV PRVIQGSLFT SARGEESSVN LRITTTNGQC IIGPDSNCLV
> TESTRKPGEI YSLVSIDDVN YNIRYSGNDV RLEKFSIVPE DSNSKIVLDT WNVEIIKDDQ
> PSRFYYKVSY VALQ
> //
>
> ID Q9C4G2_9EURY PRELIMINARY; PRT; 157 AA.
> AC Q9C4G2;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 15.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-MCR46.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=143120;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313849; AAK16879.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q9C4G2; 1-157.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 157 157
> SQ SEQUENCE 157 AA; 16867 MW; 4D6E12DDBA0F8976 CRC64;
> GGYMSGGVGF TMYATPAYTN DILDDYVYWG VDYLANKFGK PGSAKATIET VKDIGTEVTL
> YGIEQYEKYP TTLEDHFGGS QRATVLALAA GTATAMATGH SNAGLSAWYL SMYLHKEAWG
> RLGFYGYDLQ DQCGATNVFS LGSDEGCLGE VRGANYP
> //
>
> ID Q977H6_9EURY PRELIMINARY; PRT; 138 AA.
> AC Q977H6;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured Methanobacterium sp.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanobacterium; environmental samples.
> OX NCBI_TaxID=176306;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=22315376; PubMed=12427943;
> RA Luton P.E., Wayne J.M., Sharp R.J., Riley P.W.;
> RT "The mcrA gene as an alternative to 16S rRNA in the phylogenetic
> RT analysis of methanogen populations in landfill.";
> RL Microbiology 148:3521-3530(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF414031; AAL29280.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q977H6; 1-138.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 138 138
> SQ SEQUENCE 138 AA; 15223 MW; 602A614E8FA498CF CRC64;
> YTDNILDDFT YFGKEYVEDK YGITEAPNNM DTVLDVASEV TFYALEQFED YPALLETIFG
> GSQRASIVAA AAGCSTAFAT GNAQTGLSGW YLSMYLHKEQ HSRLGFYGYD LQDQCGASNV
> FSIRGDEGLP TELRGANY
> //
>
> ID Q9C4E7_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q9C4E7;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 16.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-ME29.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=143086;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313864; AAK16894.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q9C4E7; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25859 MW; EA6EEA4517DAC8EA CRC64;
> MISAYKQAAG EAATGDFAYA AKHAEVIHMG NALPQRRARG ENEPGGIAFG FLADIVQTGR
> KYPDDPVRQT LDVVAAGAML YDQIWLGSYM SGGVGFTQYA TASYTDNVLD DFTYFGQEYV
> EDKYGMTEAP NNMDTVLDVA SEVNFYALEQ FEEYPALLET IFGGSQRASI VAAAAGCSTA
> FATGNAQTGL SGWYLSMYLH KEQHSRLGFY GYDLQDQCGA SNVFSIRGDE GLPLEARGA
> //
>
> ID Q48922_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q48922;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 25.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS Methanolobus bombayensis.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanolobus.
> OX NCBI_TaxID=38023;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=B-1;
> RX MEDLINE=96174929; PubMed=8590683;
> RA Springer E., Sachs M.S., Woese C.R., Boone D.R.;
> RT "Partial gene sequences for the A subunit of methyl-coenzyme M
> RT reductase (mcrI) as a phylogenetic tool for Methanosarcinaceae.";
> RL Int. J. Syst. Bacteriol. 45:554-559(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U22257; AAC43407.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q48922; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17484 MW; 399388A228E6EFD9 CRC64;
> GSYMSGGVGF TQYATAAYCN NILDDNLYYN VDYINDKYDG AANKGTDNKV AANLDVVKDI
> ATESTIYGLE NYEKYPTTLE DHFGGSQRAT SLSAAAGSAV SIATGNGNAG LSGWYLCMYL
> HKEALGRLGF FGYDLQDQCG ATNVLSYQSD EGLALELRGP NYP
> //
>
> ID Q977H5_9EURY PRELIMINARY; PRT; 146 AA.
> AC Q977H5;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 14.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured Methanocorpusculum sp.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;
> OC Methanocorpusculaceae; Methanocorpusculum; environmental samples.
> OX NCBI_TaxID=176309;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=22315376; PubMed=12427943;
> RA Luton P.E., Wayne J.M., Sharp R.J., Riley P.W.;
> RT "The mcrA gene as an alternative to 16S rRNA in the phylogenetic
> RT analysis of methanogen populations in landfill.";
> RL Microbiology 148:3521-3530(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF414032; AAL29281.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 146 146
> SQ SEQUENCE 146 AA; 16360 MW; 7CC6067D71956D53 CRC64;
> YTDNVLDDFT YYGMDYLHDK YKIDWKNPNP KDKVKATQEV VNDIATEVNL YGMEQYEQFP
> TMMEDHFGGS QRAAVLAAAS GITTSIATGN SNAGLNGWYL SMLLHKDGWS RLGFFGYDLQ
> DQCGSANSLS IRPDEGCIGE FRGPNY
> //
>
> ID Q9C4D4_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q9C4D4;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 16.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-ME44.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=143090;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313877; AAK16907.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q9C4D4; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25806 MW; 3EA01889C8018009 CRC64;
> MISAYKQAAG EAATGDFAYA AKHAEVVHMG SYLPVRRARG ENEPGGIAFG FLADIVQTPR
> AYPDDPVRQT LDAVAAGAML YDQIWLGSYM SGGVGFTQYA TAAYTDNVLD DFTYFGQEYV
> EDKYGMTEAP NNMDTVLDVA SEVNFYALEQ FEDYPALLET IFGGSQRASI VAAAAGCSTA
> FATGNAQTGL SGWYLSMYLH KEQHSRLGFY GYDLQDQCGA SNVFSIRGDE GLPLEARGA
> //
>
> ID Q977I1_9EURY PRELIMINARY; PRT; 146 AA.
> AC Q977I1;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 14.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured Methanocorpusculum sp.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;
> OC Methanocorpusculaceae; Methanocorpusculum; environmental samples.
> OX NCBI_TaxID=176309;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=22315376; PubMed=12427943;
> RA Luton P.E., Wayne J.M., Sharp R.J., Riley P.W.;
> RT "The mcrA gene as an alternative to 16S rRNA in the phylogenetic
> RT analysis of methanogen populations in landfill.";
> RL Microbiology 148:3521-3530(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF414026; AAL29275.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 146 146
> SQ SEQUENCE 146 AA; 16309 MW; 5B6B73519374DB7F CRC64;
> YTDNILDDFT YYGMDYLHDK YKIDTKNPNP NDKVKATQEV VNDIASEVNL YGMEQYEQFP
> TMMEDHFGGS QRAAVLAAAS GITTSIATSN SNAGLNGWYL SMLMHKDGWS RLGFFGYDLQ
> DQCGSANSLS IRPDEGCIGE FRGPNY
> //
>
> ID Q8NKK8_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q8NKK8;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Galand P.E., Saarnio S., Fritze H., Yrjala K.;
> RT "Depth related diversity of methanogen Archaea in Finnish oligotrophic
> RT fen.";
> RL FEMS Microbiol. Ecol. 42:441-449(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ489774; CAD33997.2; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q8NKK8; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25656 MW; 1A486F1D22686292 CRC64;
> FIAAYNMCAG EAAVADLAFA AKHASLVEMA NMLPARRARG PNEPGGLSFG FMADICQKDR
> IKPDDPVEVS LEVVAAGCML YDQIWLGSYM SGGVGFTQYA TAAYTDNILD DYSYYGNDYA
> KKYGANGKAP KTMDVVNDLA TEVTLYGIEQ YEKYPTTLED HFGGSQRATV LAAASGVTAA
> IATGNSNAGL SAWYQSMLLH KDAWGRLGFY GYDLQDQCGS TNVFSVRSDE GSPDELRGA
> //
>
> ID Q977G2_9EURY PRELIMINARY; PRT; 139 AA.
> AC Q977G2;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS Methanobrevibacter ruminantium.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanobrevibacter.
> OX NCBI_TaxID=83816;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM 1093;
> RX MEDLINE=22315376; PubMed=12427943;
> RA Luton P.E., Wayne J.M., Sharp R.J., Riley P.W.;
> RT "The mcrA gene as an alternative to 16S rRNA in the phylogenetic
> RT analysis of methanogen populations in landfill.";
> RL Microbiology 148:3521-3530(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF414046; AAL29295.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q977G2; 1-139.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 139 139
> SQ SEQUENCE 139 AA; 15325 MW; CAB4B4D04B22FB49 CRC64;
> YTDNVLDDFS YFGKDYVEDK YGDLCSAPND MDTVLDVGSA VTFYSLEQYE EYPALLETHF
> GGSQRAAVVS AASGISTAFA TGNAQTGLSA WYLAQYLHKE QHSRLGFYGY DLQDQCGAAN
> VFAIRNDEGL PLELRGPNY
> //
>
> ID Q9C4I3_9EURY PRELIMINARY; PRT; 157 AA.
> AC Q9C4I3;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 16.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-MCR24.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosaetaceae; environmental samples.
> OX NCBI_TaxID=143073;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313828; AAK16858.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 157 157
> SQ SEQUENCE 157 AA; 16803 MW; F5FCAD90BACC7FFC CRC64;
> GSYMSGGVGF TQYATAAYTN DVLDDFCYYG VDFAVDKLGG FAKAPKTLDV AKELGTEVTL
> YGMEQYEAYP TLLEDHFGGS QRASVLAAAS GITAAIASGH SQVGLAAWYL SMLLHKEGWG
> RLGFFGYDLQ GQCGPTNVFS YQSDEGNPVE MRGANYP
> //
>
> ID Q8NKK4_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q8NKK4;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Galand P.E., Saarnio S., Fritze H., Yrjala K.;
> RT "Depth related diversity of methanogen Archaea in Finnish oligotrophic
> RT fen.";
> RL FEMS Microbiol. Ecol. 42:441-449(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ489778; CAD34001.2; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q8NKK4; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25584 MW; EFB2217B1B240F09 CRC64;
> FIAAYNMCAG EAAVADLAFA AKHASLVEMA SMLPARRARG PNEPGGLSFG FMADICQKDR
> IKPDDPVEVS LEVVAAGCML YDQIWLGSYM SGGVGFTQYA TAAYTDNILD DYSYYGNDYA
> KKYGANGKAP KTMDVVNDIA TEVTLYGIEQ YEKYPTTLED HFGGSQRATV LAAASGVAAA
> IATGNSNAGL SAWYLSMLLH KDAWGRLGFY GYDLQDQCGS TNVFSVRSDE GSPDELRGA
> //
>
> ID Q8NKK9_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q8NKK9;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Galand P.E., Saarnio S., Fritze H., Yrjala K.;
> RT "Depth related diversity of methanogen Archaea in Finnish oligotrophic
> RT fen.";
> RL FEMS Microbiol. Ecol. 42:441-449(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ489773; CAD33996.2; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q8NKK9; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25669 MW; 4B9ABECE39E14B60 CRC64;
> FIAAYNMCAG EAAVADLAFA AKHASLVEMA NMLPARRARG PNEPGGLSFG FMADICRKDR
> IKPDDPVEVS LEVVAAGCML YDQIWLGSYM SGGVGFTQYA TAAYTDNILD DYSYYGNDYA
> KKYGANGKAP KTMDVVNDLA TEVTLYGIEQ YEKYPTTLED HFGGSQRATV LAAASGVTAA
> IATGNSNAGL SAWYLSMLLH KDAWGRLGFY GYDLQDQCGS TNVFSVRSDE GSPDELRGA
> //
>
> ID O74030_METWO PRELIMINARY; PRT; 569 AA.
> AC O74030;
> DT 01-NOV-1998, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1998, sequence version 1.
> DT 30-MAY-2006, entry version 22.
> DE Tungsten formylmethanofuran dehydrogenase subunit fwdA.
> GN Name=fwdA;
> OS Methanobacterium wolfei.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanothermobacter.
> OX NCBI_TaxID=145261;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Hochheimer A., Hedderich R., Thauer R.K.;
> RT "The formylmethanofuran dehydrogenase isoenzymes in Methanobacterium
> RT wolfei and Methanobacterium thermoautotrophicum: Induction of the
> RT molybdenum isoenzyme by molybdate and constitutive synthesis of the
> RT tungsten isoenzyme.";
> RL Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ009688; CAA08783.1; -; Genomic_DNA.
> DR InterPro; IPR013108; Amidohydro_3.
> DR InterPro; IPR012027; FwdA.
> DR InterPro; IPR011059; Metal-dep_hydro_comp.
> DR Pfam; PF07969; Amidohydro_3; 1.
> DR PIRSF; PIRSF006453; FwdA; 1.
> SQ SEQUENCE 569 AA; 62668 MW; 39C0351A7932E678 CRC64;
> MEYIIKNGFV YCPLNGVDGE KMDICVKDGK IVESVSDSAK VIDASGKIVM PGGVDPHSHI
> AGAKVNVGRM YRPEDSKRDA EKFKGGRAGS GFSVPSTFMT GYRYAQMGYT TAMEAAMPPL
> LARHTHEEFH DTPIIDHAAY PLFGNNWFVM EYLKEGDVDA CAAYASWLLR ATKGYTIKIV
> NPAGTEAWGW GGNVHGIYDP APYFDITPAE IIKGLAEVNE KLQLPHSIHL HCNDLGHPGN
> YETTLASFDV PKNIKPNPAT GSRDTVLYAT HVQFHSYGGT TWRDFLSEAP KIADYVNKND
> HIVIDVGQIT LDETTTMTAD GPMEYDLHSL NGLKWANCDV ELETGSGVVP FIYSARAPVP
> AVQWAIGMEL FLLIDNLEKV CLTTDSPNAG PFTRYPRVIA WLMSNKYRMN LIEGELHKWA
> QRKSTVATID REYTFSEIAQ ITRATSAKVL GLSDTKGHLG VGADADIAVY DINPETIDPS
> AEYMAIEEAF SRAACVLKDG GIVVKDGEVV ASPHGRTYWV DTQVDESIYS EVLANVESKF
> KQYYSVNFAN YPVQDDYLPK SAPVKGVML
> //
>
> ID Q9C4J6_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q9C4J6;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 16.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-MCR09.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=143096;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313815; AAK16845.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q9C4J6; 1-156.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16957 MW; 9D40CDE824BF5950 CRC64;
> GSYMSGGVGF TQYATAAYTD NVLDDFTYFG QEYVEDKYGM TEAPNNMDTV LDVASEVNFY
> ALEQFEDYPA LLETIFGGSQ RASIVAAAAG CSTAFATGNA QTGLSGWYLS MYLHKEQHSR
> LGFYGYDLQD QCGASNVFSI RGDEGLPLEA RGANYP
> //
>
> ID Q9C4J4_9EURY PRELIMINARY; PRT; 155 AA.
> AC Q9C4J4;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 16.
> DE Methyl-coenzyme M reductase II alpha subunit (Fragment).
> GN Name=mrtA;
> OS uncultured methanogen RS-MCR11.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=143097;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313817; AAK16847.1; -; Genomic_DNA.
> DR HSSP; Q49605; 1E6V.
> DR SMR; Q9C4J4; 1-155.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 155 155
> SQ SEQUENCE 155 AA; 16792 MW; 43455219C74F304A CRC64;
> GAYMPGGVGF TQYATAAYTD DILDDFLYYG KEYVEDKFGI CQAKADMDVV KDISSEVTLY
> AMEQYEIPTL LESHFGGSQR AAVAAAAAGC STAFATGNSN AGINGWYLSQ ILHKEVHSRL
> GFYGYDLQDQ CGASNSLSVR SDEGLIHELR GPNYP
> //
>
> ID Q9C4G7_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q9C4G7;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 15.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-MCR41.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=143118;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313844; AAK16874.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q9C4G7; 1-156.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 17046 MW; 8410E6ADB309F0A7 CRC64;
> GSYMSGGVGF TQYATAAYTD DILDDFTYYG YDYAKGKYKI GQTKPTMDIV NDLGTEVTLY
> GIEQYEKYPT TLEDHFGGSQ RATVLAAASG VTTAMATGNS NAGLSAWYLS MYLHKEAWGR
> LGFFGYDLQD QCGATNVFSC RSDEGAIDEL RGPNYP
> //
>
> ID Q8NKL6_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q8NKL6;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Galand P.E., Saarnio S., Fritze H., Yrjala K.;
> RT "Depth related diversity of methanogen Archaea in Finnish oligotrophic
> RT fen.";
> RL FEMS Microbiol. Ecol. 42:441-449(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ489765; CAD33988.2; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q8NKL6; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25637 MW; F32E0A0F95048BE3 CRC64;
> FIAAYNMCAG EAAVADLAFA AKHASLVEMA NMLPARRARG PNEPGGLSFG FMADMVQTDR
> IYPDDPVRSS LEVVAAGCML YDQIWLGSYM SGGVGFTQYA TAAYTDNILD DYSYYGNDYA
> KKYGEDGKAP ATMDVVNDLG TEVTLYGTEQ YEKYPTTLED HFGGSQRATV LAAASGVTAA
> IATGNSNAGL SAWYLSMLLH KDAWGRLGFY GYDLQDQCGS TNVFSVRSDE GAPDELRGA
> //
>
> ID Q977S5_9CREN PRELIMINARY; PRT; 105 AA.
> AC Q977S5;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 14.
> DE Rhodanese-related sulfurtransferase/oxidoreductase.
> OS uncultured crenarchaeote 4B7.
> OC Archaea; Crenarchaeota; Thermoprotei; marine archaeal group 1;
> OC environmental samples.
> OX NCBI_TaxID=44557;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21633832; PubMed=11772643; DOI=10.1128/AEM.68.1.335-345.2002;
> RA Beja O., Koonin E.V., Aravind L., Taylor L.T., Seitz H., Stein J.L.,
> RA Bensen D.C., Feldman R.A., Swanson R.V., DeLong E.F.;
> RT "Comparative genomic analysis of archaeal genotypic variants in a
> RT single population and in two different oceanic provinces.";
> RL Appl. Environ. Microbiol. 68:335-345(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U40238; AAK66795.1; -; Genomic_DNA.
> DR GO; GO:0016740; F:transferase activity; IEA.
> DR InterPro; IPR001763; Rhodanese-like.
> DR Pfam; PF00581; Rhodanese; 1.
> DR SMART; SM00450; RHOD; 1.
> DR PROSITE; PS50206; RHODANESE_3; 1.
> KW Transferase.
> SQ SEQUENCE 105 AA; 11534 MW; 4633DAA6005AD61B CRC64;
> MSIQYKLIMA ESISKDQLKQ EQGSFVIIDV REPDEISNGA IENSKNMSLG LAIRNAKKGQ
> IDDLKDKKIC VYCASGYRGN IAADELVKAG FSAVNLEGGY MAWTQ
> //
>
> ID Q9C4F8_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q9C4F8;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 15.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogen RS-ME05.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=143081;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21217833; PubMed=11321536;
> RX DOI=10.1046/j.1462-2920.2001.00179.x;
> RA Lueders T., Chin K.-J., Conrad R., Friedrich M.;
> RT "Molecular analyses of methyl-coenzyme M reductase alpha-subunit
> RT (mcrA) genes in rice field soil and enrichment cultures reveal the
> RT methanogenic phenotype of a novel archaeal lineage.";
> RL Environ. Microbiol. 3:194-204(2001).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF313853; AAK16883.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q9C4F8; 1-238.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25933 MW; AE0DC2B140FAB645 CRC64;
> MISAYKQAAG EAATGDFAYA AKHAEVILMG NALPQRRARG ENEPGGIAFG FLADIVQTGR
> KYPBDPVRQT LDVVAAGAML YDQIWLGSYM SRGVGFTQYA TASYTDNVLD DFTYFGQEYV
> EDKYGMTEAP NNMDTVLDVA SEVNFYALEQ FEEYPALLET IFGGSQRASI VAAAAGCSTA
> FATGNAQTGL SGWYLSMYLH KEQHSRLGFY GYDLQDQCGA SNVFSIRGDE GLPLEARGA
> //
>
> ID Q977L5_9CREN PRELIMINARY; PRT; 122 AA.
> AC Q977L5;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Rossmann-fold nucleotide-binding protein.
> OS uncultured crenarchaeote 74A4.
> OC Archaea; Crenarchaeota; Thermoprotei; marine archaeal group 1;
> OC environmental samples.
> OX NCBI_TaxID=166279;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21633832; PubMed=11772643; DOI=10.1128/AEM.68.1.335-345.2002;
> RA Beja O., Koonin E.V., Aravind L., Taylor L.T., Seitz H., Stein J.L.,
> RA Bensen D.C., Feldman R.A., Swanson R.V., DeLong E.F.;
> RT "Comparative Genomic Analysis of Archaeal Genotypic Variants in a
> RT Single Population and in Two Different Oceanic Provinces.";
> RL Appl. Environ. Microbiol. 68:335-345(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF393466; AAK96093.1; -; Genomic_DNA.
> SQ SEQUENCE 122 AA; 12806 MW; 942F6F9091E4CC24 CRC64;
> MNACSHGAKD GNGITVGILP QDDPKFANDY CDIVIPSGMG FTRDFLNALS ADGVIIVGGG
> SGTLSEVCAA YMSKKPMVAI RGIESSITPY IDGYVDHRKN VKIIGADTAK EAVEKILELI
> TA
> //
>
> ID Q49114_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q49114;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 24.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS Methanohalobium evestigatum.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanohalobium.
> OX NCBI_TaxID=2322;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=96174929; PubMed=8590683;
> RA Springer E., Sachs M.S., Woese C.R., Boone D.R.;
> RT "Partial gene sequences for the A subunit of methyl-coenzyme M
> RT reductase (mcrI) as a phylogenetic tool for Methanosarcinaceae.";
> RL Int. J. Syst. Bacteriol. 45:554-559(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U22236; AAC43408.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q49114; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17559 MW; 8D906F78370AC39D CRC64;
> GSYMSGGVGF TQYATAAYTN NILDDNLYYD IEYINDKYNN AGKPGADNKA PATMDVVKDI
> ATESTLYGLE NYEKYPTALE DHFGGSQRAT VLSAAAGSAT SIATGNSNAG LSAWYLSMYL
> HKEAHGRLGF FGFDLQDQCG AANVFSYQSD EGLPLELRGP NYP
> //
>
> ID Q8NKW0_ACIAM PRELIMINARY; PRT; 179 AA.
> AC Q8NKW0;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 15.
> DE Hypothetical protein.
> OS Acidianus ambivalens (Desulfurolobus ambivalens).
> OC Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae;
> OC Acidianus.
> OX NCBI_TaxID=2283;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM3772, and Lei 10;
> RX MEDLINE=22830413; PubMed=12949162; DOI=10.1099/mic.0.26455-0;
> RA Laska S., Lottspeich F., Kletzin A.;
> RT "Membrane-bound hydrogenase and sulfur reductase of the
> RT hyperthermophilic and acidophilic archaeon Acidianus ambivalens.";
> RL Microbiology 149:2357-2371(2003).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM3772, and Lei 10;
> RA Laska S.;
> RL Thesis (2000), Institute of Microbiology and Genetics, Darmstadt
> RL University of Technology, Darmstadt, Germany.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ320523; CAC86880.1; -; Genomic_DNA.
> DR GO; GO:0005488; F:binding; IEA.
> DR InterPro; IPR011990; TPR-like_helical.
> DR InterPro; IPR001440; TPR_1.
> DR InterPro; IPR013105; TPR_2.
> DR InterPro; IPR013026; TPR_region.
> DR Pfam; PF00515; TPR_1; 1.
> DR Pfam; PF07719; TPR_2; 2.
> DR SMART; SM00028; TPR; 3.
> DR PROSITE; PS50005; TPR; 4.
> DR PROSITE; PS50293; TPR_REGION; 1.
> KW Hypothetical protein; Repeat; TPR repeat.
> SQ SEQUENCE 179 AA; 21241 MW; 57267A2E8FC4B26E CRC64;
> MSDIDIKINE YKRLIKIEPN NAWHHFHLGE ALEEKGELND AIEEYSRAVE LDPTFPDFHF
> KKAEALLKLS KFQEAVQVYD NAIRKDPKDA HLYHYFKGEI YEELGKYEEA LKEYNRAIEW
> SPNNSWYRQA KIYLLEKMNR LEDALKEVDE LIKIDSSAVN LELRKEILAK LKNNNNIKV
> //
>
> ID Q50828_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q50828;
> DT 01-NOV-1996, integrated into UniProtKB/TrEMBL.
> DT 01-NOV-1996, sequence version 1.
> DT 30-MAY-2006, entry version 25.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrI;
> OS Methanolobus vulcani.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanolobus.
> OX NCBI_TaxID=38026;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=96174929; PubMed=8590683;
> RA Springer E., Sachs M.S., Woese C.R., Boone D.R.;
> RT "Partial gene sequences for the A subunit of methyl-coenzyme M
> RT reductase (mcrI) as a phylogenetic tool for Methanosarcinaceae.";
> RL Int. J. Syst. Bacteriol. 45:554-559(1995).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; U22245; AAC43427.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q50828; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17522 MW; D0A88D74E71C032D CRC64;
> GSYMSGGVGF TQYATAAYCN NILDDNLYYN VDYINDKYDG AANKGTDNKV KASLDVVKDI
> ATESTIYGLE NYEKYPTTLE DHFGGSQRAT SLSAAAGSAV ALATGNGNAG LSGWYLCMYL
> HKEAHGRLGF FGYDLQDQCG ATNVLSYQSD EGLALELRGP NYP
> //
>
> ID Q8NKM9_9CREN PRELIMINARY; PRT; 221 AA.
> AC Q8NKM9;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 15.
> DE Putative phosphoserine phosphatase.
> OS uncultured crenarchaeote.
> OC Archaea; Crenarchaeota; environmental samples.
> OX NCBI_TaxID=29281;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=22252841; PubMed=12366755;
> RX DOI=10.1046/j.1462-2920.2002.00345.x;
> RA Quaiser A., Ochsenreiter T., Klenk H.P., Kletzin A., Treusch A.H.,
> RA Meurer G., Eck J., Sensen C.W., Schleper C.;
> RT "First insight into the genome of an uncultivated crenarchaeote from
> RT soil.";
> RL Environ. Microbiol. 4:603-611(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ496176; CAD42691.1; -; Genomic_DNA.
> DR GO; GO:0003824; F:catalytic activity; IEA.
> DR GO; GO:0016791; F:phosphoric monoester hydrolase activity; IEA.
> DR GO; GO:0008152; P:metabolism; IEA.
> DR InterPro; IPR005834; Dehalogen-like_hydro.
> DR InterPro; IPR006383; HAD-SF_hydro_IB_PSP-like.
> DR Pfam; PF00702; Hydrolase; 1.
> DR TIGRFAMs; TIGR01488; HAD-SF-IB; 1.
> SQ SEQUENCE 221 AA; 24742 MW; 88F6ED94D289722E CRC64;
> MLYPMEFKST LAVFDMDGTL IDGRLIEVLS KKFGLYAQVR HIQSDKSIPG YVKTQKIAAV
> IRGIEEREIE IALDSIPPAK NSQEVISLLK KKGFRIGIIT DSYSVAAQAL VNKLDLDFFY
> ANELKVDNGI VTGEINMPLG WEKIDCFCKN SVCKRYHMEI HAKKICADIK NTIAIGDTKG
> DLCMIKQAGI GIAYMPKDKY INETINKVNT PDMIGVLDFI E
> //
>
> ID Q977G1_9EURY PRELIMINARY; PRT; 138 AA.
> AC Q977G1;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS Methanosphaera stadtmanae.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanosphaera.
> OX NCBI_TaxID=2317;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM 3091;
> RX MEDLINE=22315376; PubMed=12427943;
> RA Luton P.E., Wayne J.M., Sharp R.J., Riley P.W.;
> RT "The mcrA gene as an alternative to 16S rRNA in the phylogenetic
> RT analysis of methanogen populations in landfill.";
> RL Microbiology 148:3521-3530(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF414047; AAL29296.1; -; Genomic_DNA.
> DR HSSP; Q49605; 1E6V.
> DR SMR; Q977G1; 1-138.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 138 138
> SQ SEQUENCE 138 AA; 14930 MW; D4A7A5D2426675C4 CRC64;
> YTDEILDDFI YYGKDYVEGK YGGLCQAEAT SEVVKDIASE VTLYGLEQYE IPAALEDHFG
> GSQRAAVLAA GAGCSVAFAT ANSNAGVNGW YLSQLLHKEG HSRLGFYGYD LQDQCGSSNS
> LSVRSDEGLI HELRGPNY
> //
>
> ID Q8NKT2_ACIAM PRELIMINARY; PRT; 145 AA.
> AC Q8NKT2;
> DT 01-OCT-2002, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2002, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Molybdopterin biosynthesis protein (Fragment).
> GN Name=moeA;
> OS Acidianus ambivalens (Desulfurolobus ambivalens).
> OC Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae;
> OC Acidianus.
> OX NCBI_TaxID=2283;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=Lei 10;
> RX MEDLINE=22830413; PubMed=12949162; DOI=10.1099/mic.0.26455-0;
> RA Laska S., Lottspeich F., Kletzin A.;
> RT "Membrane-bound hydrogenase and sulfur reductase of the
> RT hyperthermophilic and acidophilic archaeon Acidianus ambivalens.";
> RL Microbiology 149:2357-2371(2003).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=Lei 10;
> RA Laska S.;
> RL Thesis (2000), Department of Institute of Microbiology and Genetics,
> RL Darmstadt University of Technology, Darmstadt, Germany.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ345004; CAC86942.1; -; Genomic_DNA.
> DR GO; GO:0006777; P:Mo-molybdopterin cofactor biosynthesis; IEA.
> DR InterPro; IPR001453; MPT_bd.
> DR Pfam; PF00994; MoCF_biosynth; 1.
> DR ProDom; PD002460; MoCF_biosynth; 1.
> FT NON_TER 1 1
> SQ SEQUENCE 145 AA; 15661 MW; 7A6AC63B61AA3465 CRC64;
> VIKAKADKYG WGIVYKEIVP DDENKIVEAI KSAVNNGAEA VIVTGGTSVD ATDKTPIAIS
> KLGKIISYGL PIKPTTMSIV AMWDSIPIFG ISAGGIYYRD YNAIDVMFTR LMAGIIPRKE
> DIAMMGHGGL LPNFQPKMKL QSINS
> //
>
> ID Q977L6_9CREN PRELIMINARY; PRT; 393 AA.
> AC Q977L6;
> DT 01-DEC-2001, integrated into UniProtKB/TrEMBL.
> DT 01-DEC-2001, sequence version 1.
> DT 30-MAY-2006, entry version 19.
> DE 3-hydroxyacyl-CoA dehydrogenase.
> OS uncultured crenarchaeote 74A4.
> OC Archaea; Crenarchaeota; Thermoprotei; marine archaeal group 1;
> OC environmental samples.
> OX NCBI_TaxID=166279;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=21633832; PubMed=11772643; DOI=10.1128/AEM.68.1.335-345.2002;
> RA Beja O., Koonin E.V., Aravind L., Taylor L.T., Seitz H., Stein J.L.,
> RA Bensen D.C., Feldman R.A., Swanson R.V., DeLong E.F.;
> RT "Comparative Genomic Analysis of Archaeal Genotypic Variants in a
> RT Single Population and in Two Different Oceanic Provinces.";
> RL Appl. Environ. Microbiol. 68:335-345(2002).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF393466; AAK96092.1; -; Genomic_DNA.
> DR HSSP; Q16836; 1F0Y.
> DR GO; GO:0009331; C:glycerol-3-phosphate dehydrogenase complex; IEA.
> DR GO; GO:0004367; F:glycerol-3-phosphate dehydrogenase (NAD+) a...; IEA.
> DR GO; GO:0016491; F:oxidoreductase activity; IEA.
> DR GO; GO:0006631; P:fatty acid metabolism; IEA.
> DR GO; GO:0006072; P:glycerol-3-phosphate metabolism; IEA.
> DR InterPro; IPR006108; 3HC_DH_C.
> DR InterPro; IPR006176; 3HCDH_NAD_bd.
> DR InterPro; IPR008927; 6DGDH_C_like.
> DR InterPro; IPR000205; FAD/NAD(P)_BS.
> DR InterPro; IPR006168; NAD_Gly3P_DH.
> DR Pfam; PF00725; 3HCDH; 1.
> DR Pfam; PF02737; 3HCDH_N; 1.
> DR PRINTS; PR00077; GPDHDRGNASE.
> SQ SEQUENCE 393 AA; 44177 MW; 0384DDDD22E9B91E CRC64;
> MKKYVIKDTE FHQHMLVKNI TVLGSGVMGH GIAQVSATAG YNVVLRDIKQ EFLDKAMEKI
> KWSLDKLVSK EKITKEEADS IFSRIIPIVD LKEAVKNAEM IIEVVPEIME LKKKVYAELD
> AVAGPDVIFA SNTSTLPITE IANTTSRPEK FIGIHFFNPP QLMKLVEIIP GEKTTQAITD
> LTQEYVKSVN KQAVPSRKDV PGFIINRLFI PMVHEACYAQ DRTNATLEEI DSAVKFKLGF
> PMGIFELADF TGMDVIHKAT VEMHLRDKKV INPHPTIGKM FDEKKLGQKS GEGYYKYSDD
> KYERVALSEE LAEKFNPIQL VANILNNAAW LITNGASDIS EIEKAAQLGL GLKKPLFETA
> KEIGIKNIVD ELNRLEKEHG EFYKPDPLLI SML
> //
>
> ID Q9C4S0_METAC PRELIMINARY; PRT; 310 AA.
> AC Q9C4S0;
> DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2001, sequence version 1.
> DT 30-MAY-2006, entry version 14.
> DE Hypothetical protein (Fragment).
> OS Methanosarcina acetivorans.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanosarcina.
> OX NCBI_TaxID=2214;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=C2A;
> RX PubMed=15882413; DOI=10.1111/j.1365-2958.2005.04616.x;
> RA Pritchett M.A., Metcalf W.W.;
> RT "Genetic, physiological and biochemical characterization of multiple
> RT methanol methyltransferase isozymes in Methanosarcina acetivorans
> RT C2A.";
> RL Mol. Microbiol. 56:1183-1194(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AF319042; AAK07602.1; -; Genomic_DNA.
> DR GO; GO:0003677; F:DNA binding; IEA.
> DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA.
> DR GO; GO:0006260; P:DNA replication; IEA.
> DR InterPro; IPR004013; PHP_C.
> DR InterPro; IPR003141; PHP_N.
> DR Pfam; PF02811; PHP; 1.
> DR SMART; SM00481; POLIIIAc; 1.
> KW Hypothetical protein.
> FT NON_TER 1 1
> SQ SEQUENCE 310 AA; 35378 MW; 0E738DBCF3A7D5AC CRC64;
> QEGWKKVDLH VHSSCSYDVP PAKAMHPSVL FEKARAKGLD YVTFTDHDTV EAYNLLGWDR
> EGLVPGVEIS IKDPENIGHT LHVNVFELDS EEFGELEAIV NQEHDFKSFI RYLRLHDLPH
> IYNHPFWFAI GDRPNLRAVP ELIKQFPVIE YNMQDLTEKN LITAALARKY GKGLAATTDS
> HTGGMGAVYT LAKGDSFREY FDNIKNGRSY MVIEGGARRH LTKELNAWVE LVFSMDRNAR
> GEVGFTTNVK TFDRLIGFFA NGKIREFPRI NGLAMKFFQN FSRSGLPAYM YMRAEKPLIS
> RIEKVVNLTA
> //
>
> ID Q7ZAF4_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q7ZAF4;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured Methanosarcinaceae archaeon.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; environmental samples.
> OX NCBI_TaxID=176230;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Chin K.-J., Lueders T., Klose M., Conrad R.;
> RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY125612; AAN02179.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q7ZAF4; 1-162.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 17640 MW; 075472D65C69DF73 CRC64;
> GAYMSGGVGF TQYATAAYTD DILDDFVYYG YDYIKGKYGV AKAKCTMDVV NDIGTEVTLY
> GIEQYEKYPT TLEDHFGGSQ RATVLSAAAG SVTSMATGNA NAGLSAWYLS MYLHKEAWGR
> LGFFGYDLQD QCGATNVFSC RSDEGAIDEL RGPNYPNYAM NV
> //
>
> ID Q7ZAF2_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q7ZAF2;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase II alpha subunit (Fragment).
> GN Name=mrtA;
> OS uncultured Methanobacteriaceae archaeon.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=176233;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Chin K.-J., Lueders T., Klose M., Conrad R.;
> RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY125614; AAN02181.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q7ZAF2; 1-162.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 17577 MW; 6B661B485480F0B3 CRC64;
> GSYMSGGVGF TQYATAAYTD NVLDDFTYYG KEYVEDKYGM TEAPNTMETV LDVGSEVTFY
> ALEQFEEYPA LLETVFGGSQ RASIVAAAAG ASTGFATGNA QTGLSAWYLS MYLHKEQHSR
> LGFYGYDLQD QCGAANTFAI RGDEGLPLEA RGANYPNYAM NV
> //
>
> ID Q7ZAD5_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q7ZAD5;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured Methanobacteriaceae archaeon.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=176233;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Chin K.-J., Lueders T., Klose M., Conrad R.;
> RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY125640; AAN02207.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q7ZAD5; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17793 MW; 8CAB3E679B971E1F CRC64;
> LGSYMSGGVG FTQYATASYT DNVLDDFTYF GQEYVEDKYG MTEAPNNMDT VLDVASEVNF
> YALEQFEEYP ALLETIFGGS QRASIVAAAA GCSTAFATGN AQTGLSGWYL SMYLHKEQHS
> RLGFYGYDLQ DQCGASNVFS IRGDEGLPLE ARGANYPNYA MNV
> //
>
> ID Q7ZAC4_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q7ZAC4;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase II alpha subunit (Fragment).
> GN Name=mrtA;
> OS uncultured Methanobacteriaceae archaeon.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=176233;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Chin K.-J., Lueders T., Klose M., Conrad R.;
> RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY125659; AAN02226.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q7ZAC4; 1-162.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 17679 MW; D7357D7790590D5F CRC64;
> GSYMSGGVGF TQYATASYTD NVLDDFTYFG QEYVEDKYGM TEAPNNMDTV LDVASEVNFY
> ALEQFEEYPA LLETIFGGSQ RASIVAAAAG CSTAFATGNA QTGLSGWYLS MYLHKEQHSR
> LGFYGYDLQD QCGASNVFSI RGDEGLPLEA RGANYPNYAM NV
> //
>
> ID Q7ZAC2_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q7ZAC2;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured Methanosarcinaceae archaeon.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; environmental samples.
> OX NCBI_TaxID=176230;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Chin K.-J., Lueders T., Klose M., Conrad R.;
> RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY125661; AAN02228.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q7ZAC2; 1-162.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 17641 MW; 7989F6A4E5B474E1 CRC64;
> GSYMSGGVGF TQYATAAYTD DILDDFCYYG YDYIKGKYGV AKAKCTMDVV NDIGSEVTLY
> GIEQYEKYPT TLEDHFGGSQ RATVLSAAAG VTTSIATGNA NAGLSAWYLS MYLHKEAWGR
> LGFFGYDLQD QCGATNVFSC RSDEGAIDEL RGPNYPNYAM NV
> //
>
> ID Q7ZAC0_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q7ZAC0;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase II alpha subunit (Fragment).
> GN Name=mrtA;
> OS uncultured Methanobacteriaceae archaeon.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=176233;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Chin K.-J., Lueders T., Klose M., Conrad R.;
> RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY125663; AAN02230.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q7ZAC0; 1-162.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 17593 MW; B47E9015E1F4FFDB CRC64;
> GSYMSGGVGF TQYATAAYTD NVLDDFTYFG QEYVEDKYGM TEAPNTMETV LDVGSEVTFY
> ALEQFEDYPA LLETIFGGSQ RASIVAAAAG CSAGFATGNA QTGLSAWYLS MYLHKEQHSR
> LGFYGYDLQD QCGASNVFSI RGDEGLPLEA RGANYPNYAM NV
> //
>
> ID Q7ZAB9_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q7ZAB9;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured Methanobacteriaceae archaeon.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; environmental samples.
> OX NCBI_TaxID=176233;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Chin K.-J., Lueders T., Klose M., Conrad R.;
> RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY125665; AAN02232.1; -; Genomic_DNA.
> DR HSSP; P11558; 1HBN.
> DR SMR; Q7ZAB9; 1-162.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 17603 MW; 92756C77904C5818 CRC64;
> GSYMSGGVGF TQYATASYTD NVLDDFTYFG QEYVEDKYGM TEAPNNMDTV PDVASEVNFY
> ALEQFEEYPA LLETIFGGSQ RASIVAAAAG CSTAFATGNA QTGLSGWYLS MYLHKEQHSR
> LGSYGYDLQD QCGASNVFSI RGDEGLPLEA RGANYPNYAM NV
> //
>
> ID Q7ZA90_9EURY PRELIMINARY; PRT; 147 AA.
> AC Q7ZA90;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase II alpha subunit (Fragment).
> GN Name=mrtA;
> OS Methanothermobacter thermophilus.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanothermobacter.
> OX NCBI_TaxID=49341;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM 6529;
> RA Lausten T., Westermann P., Ahring B.K.;
> RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY289753; AAQ18239.1; -; Genomic_DNA.
> DR HSSP; Q49605; 1E6V.
> DR SMR; Q7ZA90; 1-147.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 147 147
> SQ SEQUENCE 147 AA; 15996 MW; 2B4EA5B0D40B0DAE CRC64;
> GGVGFTQYAT AAYTDDILDD FVYYGMEYVD DKYGICGTKP TMDVVRDIST EVTLYSLEQY
> EEYPTLLEDH FGGSQRAAVA AAAAGCSTAF ATGNSNAGIN GWYLSQILHK EAHSRLGFYG
> YDLQDQCGAS NSLSIRSDEG LIHELRG
> //
>
> ID Q7ZA87_9EURY PRELIMINARY; PRT; 147 AA.
> AC Q7ZA87;
> DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
> DT 01-OCT-2003, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase II alpha subunit (Fragment).
> GN Name=mrtA;
> OS Methanothermobacter thermoflexus.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanothermobacter.
> OX NCBI_TaxID=49340;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM 7268;
> RA Lausten T., Westermann P., Ahring B.K.;
> RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY303951; AAQ21199.1; -; Genomic_DNA.
> DR HSSP; Q49605; 1E6V.
> DR SMR; Q7ZA87; 1-147.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> FT NON_TER 1 1
> FT NON_TER 147 147
> SQ SEQUENCE 147 AA; 16012 MW; D0B87FB0D41DD7A0 CRC64;
> GGVGFTQYAT ASYTDDILDD FVYYGMEYVD DKYGICGTKP TMDVVRDIST EVTLYSLEQY
> EEYPTLLEDH FGGSQRAAVA AAAAGCSTAF ATGNSNAGIN GWYLSQILHK EAHSRLGFYG
> YDLQDQCGAS NSLSIRSDEG LIHELRG
> //
>
> ID Q877F5_9EURY PRELIMINARY; PRT; 240 AA.
> AC Q877F5;
> DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
> DT 01-JUN-2003, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS Methanomethylovorans hollandica.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosarcinaceae; Methanomethylovorans.
> OX NCBI_TaxID=101192;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX MEDLINE=22748895; PubMed=12866859; DOI=10.1078/072320203322346173;
> RA Simankova M.V., Kotsyurbenko O.R., Lueders T., Nozhevnikova A.N.,
> RA Wagner B., Conrad R., Friedrich M.W.;
> RT "Isolation and characterization of new strains of methanogens from
> RT cold terrestrial habitats.";
> RL Syst. Appl. Microbiol. 26:312-318(2003).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY260442; AAP20897.1; -; Genomic_DNA.
> DR HSSP; P07962; 1E6Y.
> DR SMR; Q877F5; 1-240.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 240 240
> SQ SEQUENCE 240 AA; 25625 MW; 2C23726350D3BE77 CRC64;
> EAAVADLSYA AKHAGVISMG EMLPARRARG PNEPGGISFG HLSDIVQTSR VDPEDPAHVA
> LEVVGAGCML YDQIWLGSYM SGGVGFTQYA TAAYTNNILD DNLYYNVDYI NDKYNGAAKK
> GTDNKVKATL EVVKDIATES TLYGMENYEK YPTALEDHFG GSQRATVLSA AAGAATAIAT
> GNGNAGLSGW YLSMYLHKEG HGRLGFFGFD LQDQCGATNV LSYQSDEGLP VELRGPNYPN
> //
>
> ID Q75NC6_9ARCH PRELIMINARY; PRT; 216 AA.
> AC Q75NC6;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase (Fragment).
> GN Name=mcrA;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15574947; DOI=10.1128/AEM.70.12.7445-7455.2004;
> RA Inagaki F., Tsunogai U., Suzuki M., Kosaka A., Machiyama H., Takai K.,
> RA Nunoura T., Nealson K.H., Horikoshi K.;
> RT "Characterization of C1-metabolizing prokaryotic communities in
> RT methane seep habitats at the Kuroshima Knoll, southern Ryukyu Arc, by
> RT analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes.";
> RL Appl. Environ. Microbiol. 70:7445-7455(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AB176931; BAD16563.1; -; Genomic_DNA.
> DR SMR; Q75NC6; 1-216.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 216 216
> SQ SEQUENCE 216 AA; 22858 MW; D618DE46A9F2AF4B CRC64;
> AGEAAVADLA FGAKHAGLVS MSEMLPARRA RGPNEPGGLS FGYMADIVQT SRITPDDPCN
> VTLEVAGAAS MLYDQIWLGG YMSGGVGFTQ FASCVYTNDI LDDFLYWGAD YIVDKYGEYG
> KAEVSLGAIK DIATVVTLYG LENYEEYPTA LEDHFGGSQR ATVIAISAGG STALATGNSS
> AAMSAWHLSM YLHKEAWGRL GAFGYDQQDQ CGAANV
> //
>
> ID Q70CN7_9EURY PRELIMINARY; PRT; 253 AA.
> AC Q70CN7;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Galand P.E., Juottonen H., Fritze H., Yrjala K.;
> RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ586250; CAE51953.1; -; Genomic_DNA.
> DR SMR; Q70CN7; 2-253.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 253 253
> SQ SEQUENCE 253 AA; 27113 MW; 2D29FDF761E13A32 CRC64;
> FFISAYSMCA GEAAVADLSF AAKHAALVSM GEMLPARRAR GPNEPGGLSF GHISDIIQTS
> RKAIDDPAKV ALEVVGAGCM LYDQIWLGSY MSGGVGFTQY ATAAYTDDIL DNNVYYNIDY
> INDKYKGAAK VGKDNKIKAT LDVVKDIATE STIYGIETYE KFPTALEDHF GGSQRATVLA
> AAAGVATAIA TANANAGLSA WYLSMYLHKE AWGRLGFFGY DLQDQCGATN VLSYQGDEGL
> PDELRGPNYP NYA
> //
>
> ID Q704C6_THETE PRELIMINARY; PRT; 735 AA.
> AC Q704C6;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 10.
> DE Trehalose-6-phosphate synthase-phosphatase.
> GN Name=tpsp;
> OS Thermoproteus tenax.
> OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales;
> OC Thermoproteaceae; Thermoproteus.
> OX NCBI_TaxID=2271;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15028704; DOI=10.1128/JB.186.7.2179-2194.2004;
> RA Siebers B., Tjaden B., Michalke K., Doerr C., Ahmed H., Zaparty M.,
> RA Gordon P., Sensen C.W., Zibat A., Klenk H.-P., Schuster S.C.,
> RA Hensel R.;
> RT "Reconstruction of the central carbohydrate metabolism of
> RT Thermoproteus tenax using genomic and biochemical data.";
> RL J. Bacteriol. 186:2179-2194(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ621287; CAF18468.1; -; Genomic_DNA.
> DR GO; GO:0003825; F:alpha,alpha-trehalose-phosphate synthase (U...; IEA.
> DR GO; GO:0003824; F:catalytic activity; IEA.
> DR GO; GO:0008152; P:metabolism; IEA.
> DR GO; GO:0005992; P:trehalose biosynthesis; IEA.
> DR InterPro; IPR001830; Glyco_trans_20.
> DR InterPro; IPR006379; HAD-SF_hydro_IIB.
> DR InterPro; IPR012766; Trehalose_OtsA.
> DR InterPro; IPR003337; Trehalose_PPase.
> DR Pfam; PF00982; Glyco_transf_20; 1.
> DR Pfam; PF02358; Trehalose_PPase; 1.
> DR TIGRFAMs; TIGR01484; HAD-SF-IIB; 1.
> DR TIGRFAMs; TIGR00685; T6PP; 1.
> DR TIGRFAMs; TIGR02400; trehalose_OtsA; 1.
> SQ SEQUENCE 735 AA; 82040 MW; AF7A68E3844804ED CRC64;
> MGGQVRLIVV SNRLPVTISP SGEIRESVGG LATAMKSFLG AVNGGRELGL EEVVWVGWSG
> VPSERESNDL RERLRGMGLE PVPLSSEEVE GFYEGFSNST LWPLFHGFSE YATYEEKHWR
> AYRGVNEKYA KAVVALARPG DLVWIHDYHL MLAPAIVREA AEVGVGFFLH IPFPPAELLQ
> LLPSEWRREI LEGLLGSDLV GFHTYEYSAN FSRSVVRFLG YKVEMGAIAV GHRRVRVGVF
> PIGIDFDRFY NSSQDPSVVE EMAKLREMLG RAKVVFSIDR LDYTKGVLRR VAAWERFLRE
> HPEWRGRAVF VLVVVPSRTG VPMYEEMKRQ IDREVGRING ELGELNWVPI VYLYRFIPSP
> TLMALYNIAD VALITPLRDG MNLVAKEFVA SKRDCRGVLI LSELAGASKE LAEALVINPN
> DVGGTAEAIA EALSMSEDEQ CRRIRAMQER LRMRDVVRWG TDFIYSLISA KSAREEVEKA
> LRYMEELSVD KLKSDFAKAK RRLLLLDYDG TLVPHYPYPH MAVPDGDLLE LLSRLAALPE
> TAVYVVSGRG RDFLDGWLGR LPVGLVAEHG FFLKHPGGEW KSLGKVDPSW RQYAKGIMED
> FASNVPGSFV EVKEAGIAWH YRNADETIAE KAVVELIDAL SNALAGSGLS ILRGKKVVEV
> RPAGYTKGTA AKMLLDELSP DFVFVAGDDE TDEGMFEVAP QSAYTVKVGP GPTLAKFRVG
> DYRGLRSLLE QLRPP
> //
>
> ID Q704B9_THETE PRELIMINARY; PRT; 610 AA.
> AC Q704B9;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Glycogen phosphorylase (EC 2.4.1.1).
> GN Name=glgP;
> OS Thermoproteus tenax.
> OC Archaea; Crenarchaeota; Thermoprotei; Thermoproteales;
> OC Thermoproteaceae; Thermoproteus.
> OX NCBI_TaxID=2271;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15028704; DOI=10.1128/JB.186.7.2179-2194.2004;
> RA Siebers B., Tjaden B., Michalke K., Doerr C., Ahmed H., Zaparty M.,
> RA Gordon P., Sensen C.W., Zibat A., Klenk H.-P., Schuster S.C.,
> RA Hensel R.;
> RT "Reconstruction of the central carbohydrate metabolism of
> RT Thermoproteus tenax using genomic and biochemical data.";
> RL J. Bacteriol. 186:2179-2194(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ621294; CAF18475.1; -; Genomic_DNA.
> DR GO; GO:0004645; F:phosphorylase activity; IEA.
> DR GO; GO:0016757; F:transferase activity, transferring glycosyl...; IEA.
> DR GO; GO:0009058; P:biosynthesis; IEA.
> DR GO; GO:0005975; P:carbohydrate metabolism; IEA.
> DR InterPro; IPR000173; GAP_DH.
> DR InterPro; IPR001296; Glyco_trans_1.
> DR InterPro; IPR000811; Glyco_trans_35.
> DR PANTHER; PTHR11468; Glyco_trans_35; 1.
> DR Pfam; PF00534; Glycos_transf_1; 1.
> DR PIRSF; PIRSF000460; Pprylas_GlgP; 1.
> DR PROSITE; PS00071; GAPDH; UNKNOWN_1.
> KW Glycosyltransferase; Transferase.
> SQ SEQUENCE 610 AA; 68870 MW; E136805C0AE3F9BD CRC64;
> MLPSPYPPVI GDLAATTNLP VLTFVKPVNG PAANMSLLCG ESGSVPGGSS SHNIFIASPL
> PPMKSLAIEA SSSCTTNFLL VRSTLRILPC HPGMDCLSIL IYHFYLRRVA RFGDIAFKLT
> MPPRAMIVSI TPELALDGSK NYAGGLGVLE GDKFYAAARL GVPYTVITLL YDRGYVEYTE
> QNGQLEPTEE DQSNFIKRLE LFRTCWTTVG GEEVEVAFYL YRLNTATAVF VKPLRPAWAA
> QATERLYIER TELERFRKYI ILAKAALRYI EKFIGWDRVK YVDLQEAYTA LVPLLKPDPR
> YRLVVHTPAP WGHPTFPSRF FRQELGFDLA MNPVVLTELG LAASSEGVVV SKKMVHFAAR
> TFPHHAHKIK AVTNAVEIPR WQHPAVADVK GPEELKAARA RVKEEALRAL GVRTDRPVIV
> WARRLTSYKR PHYMVQLIEE VNTDLFFILG GRAHPNDEYG RRIMAEFKRL AATRPNVLYI
> PSLYVEDMRK IIWAADIFTF TPFSGWEASG TSFMKAGING VPSVASRDGA VVEVVRDRYN
> GWLFGEDRTE LVSPDTPDID EREYAEFKQK VNEALDALAD GSYWEVAFNA YKTFREYYSM
> ERLFKEYGYL
> //
>
> ID Q702A3_9CREN PRELIMINARY; PRT; 448 AA.
> AC Q702A3;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 14.
> DE Putative molybdopterin biosynthesis protein.
> OS uncultured crenarchaeote.
> OC Archaea; Crenarchaeota; environmental samples.
> OX NCBI_TaxID=29281;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Treusch A.H., Kletzin A., Raddatz G., Ochsenreiter T., Quaiser A.,
> RA Meurer G., Schuster S.C., Schleper C.;
> RT "Characterization of Large-Insert DNA Libraries from Soil for
> RT Environmental Genomic Studies of Archaea.";
> RL Environ. Microbiol. 9:970-980(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ627421; CAF28721.1; -; Genomic_DNA.
> DR HSSP; P12282; 1JWA.
> DR GO; GO:0003824; F:catalytic activity; IEA.
> DR GO; GO:0006790; P:sulfur metabolism; IEA.
> DR InterPro; IPR000205; FAD/NAD(P)_BS.
> DR InterPro; IPR009036; MoeB.
> DR InterPro; IPR007901; MoeZ_MoeB.
> DR InterPro; IPR000594; ThiF_NAD_FAD_bd.
> DR InterPro; IPR003749; ThiS.
> DR Pfam; PF05237; MoeZ_MoeB; 1.
> DR Pfam; PF00899; ThiF; 1.
> DR Pfam; PF02597; ThiS; 1.
> SQ SEQUENCE 448 AA; 49046 MW; 3FDED96767FCF5DA CRC64;
> MTNIEFVIPS VLTKGTGEKK IPLDATDLQD AFTKITEQLG EDFKRKVLDM NGKPRSLINI
> YINGKNMRFS NDGMATKLNS GDSIYILPAV AGGSELKNED LQRYSRQIML EEIGFVGLEK
> LRKAKVCVVG VGGIGNPVVT QLTAMGVGKL KIVDRDIIEI SNLHRQHLYT ENDLGKVKVE
> AAKERLEKIN SSVEIEALPN SVTKYTAESI IRGYDIVVDA LDSIDARYAL NDACIKLNIP
> LIYAGALGML GSVCTIIPNK TACLRCIFPA LAEDDMPTCS TEGVHPSILY LVGGIQVSEA
> VKIILGEKPT LENKLMYVDL NDLSLEKISV FRQEECPSCG TKRIDIDELE TKQLIIEELC
> GRDRGKRTYT VTPSHISSSL NLIGIEKNAE RLGYTIKTKG ELGLTIMSNN SDNLSISFMS
> SGAATIVGAK SEDEALSIYK SFVDDIKP
> //
>
> ID Q6ZXB1_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q6ZXB1;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15812059; DOI=10.1128/AEM.71.4.2195-2198.2005;
> RA Galand P.E., Fritze H., Conrad R., Yrjala K.;
> RT "Pathways for methanogenesis and diversity of methanogenic Archaea in
> RT three different boreal peatlands.";
> RL Appl. Environ. Microbiol. 71:2195-2198(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ704551; CAG28707.1; -; Genomic_DNA.
> DR SMR; Q6ZXB1; 1-155.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16799 MW; 721FEB54E1886332 CRC64;
> GGVGFTQYAT AAYTDNILDD YSYYGNDYAK KYGADGKAPA TMDVVNDLGT EVTLYGIEQY
> EKYPTTLEDH FGGSQRATVL AAASGVTAAI ATGNSNAGLS AWYLSMLLHK DAWGRLGFYG
> YDLQDQCGST NTFSVRSDEG APDELRGANY PNYAMK
> //
>
> ID Q6ZXA7_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q6ZXA7;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15812059; DOI=10.1128/AEM.71.4.2195-2198.2005;
> RA Galand P.E., Fritze H., Conrad R., Yrjala K.;
> RT "Pathways for methanogenesis and diversity of methanogenic Archaea in
> RT three different boreal peatlands.";
> RL Appl. Environ. Microbiol. 71:2195-2198(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ704555; CAG28711.1; -; Genomic_DNA.
> DR SMR; Q6ZXA7; 1-156.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16863 MW; B2F9EBC5FE28283D CRC64;
> GGVGFTQYAT AAYTDNILDD YTEYGVDYIK KKHGGIGKAK CTQEVVSDIA TEVNLYGMKQ
> YEQYPTALES HFGGSQRASV LAAASGISVG LATANSNAGL NGWYLSMLMH KEGWSRLGFF
> GYDLQDQCGS ANCMSIRPDE GLLGELRGPN YPNYAM
> //
>
> ID Q6V265_9EURY PRELIMINARY; PRT; 154 AA.
> AC Q6V265;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Nercessian O.G., Bienvenu N., Moreira D., Prieur D., Jeanthon C.;
> RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY354021; AAQ56610.1; -; Genomic_DNA.
> DR SMR; Q6V265; 1-154.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 154 154
> SQ SEQUENCE 154 AA; 16894 MW; 5E8D758B5BD5179D CRC64;
> GGVGFTQYAT AAYTDDILDD FCYYGLDYVE NKYGRNGTKP TMDVVEDIAT EVTLYALEQY
> DEYPTLLEDH FGGSQRAAVA AAAAGVSTCM ATGNSNAGVN AWYLSQIMHK EYHSRLGFYG
> YDLQDQCGAS NSLSIRNDES SPLELRGPNY PNYA
> //
>
> ID Q6V263_9EURY PRELIMINARY; PRT; 154 AA.
> AC Q6V263;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Nercessian O.G., Bienvenu N., Moreira D., Prieur D., Jeanthon C.;
> RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY354023; AAQ56612.1; -; Genomic_DNA.
> DR SMR; Q6V263; 1-154.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 154 154
> SQ SEQUENCE 154 AA; 16689 MW; 1BD57F0837C60913 CRC64;
> GVGFTQYATA VYTDNILDGY VYYGLDYVED KYGLAEAEPD MDVVKDVATE VTLYGLEQYE
> RYPAAMETHF GGSQRAAVCA AAAGCSVAFA TGHAQAGVNG WYLSQILHKE AHGRLGFYGY
> DLQDQCGAAN SLSVRSDEGL PLELRGPNYP NYAM
> //
>
> ID Q6V262_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q6V262;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Nercessian O.G., Bienvenu N., Moreira D., Prieur D., Jeanthon C.;
> RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY354024; AAQ56613.1; -; Genomic_DNA.
> DR SMR; Q6V262; 1-155.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16983 MW; 92FD931E6BBD8D5D CRC64;
> GGVGFTQYAT AVYTDNILDD YVYYGLEYVE DKYGLAEADP SMDVVKDVAT EVTLYGLEQY
> ERYPAAMETH FGGSQRAAVC AAATGCSVSF ATGHAQAGLN GWYLSQIMHK EGHGRLGFYG
> YDLQDQCGAA NTLSVRSDEG LPLELRGPNY PNYAMK
> //
>
> ID Q6V253_9EURY PRELIMINARY; PRT; 154 AA.
> AC Q6V253;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS Methanothermococcus okinawensis.
> OC Archaea; Euryarchaeota; Methanococci; Methanococcales;
> OC Methanococcaceae; Methanothermococcus.
> OX NCBI_TaxID=155863;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=DSM 14208;
> RA Nercessian O.G., Bienvenu N., Moreira D., Prieur D., Jeanthon C.;
> RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY354033; AAQ56622.1; -; Genomic_DNA.
> DR SMR; Q6V253; 1-154.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 154 154
> SQ SEQUENCE 154 AA; 16879 MW; 4C04E07CDA356AE5 CRC64;
> GGVGFTQYAT ATYTDDILDD FSYYGYDYVE KKYGINGTKP TMDVVEDIAT EVTLYGLEQY
> DEFPALLEDH FGGSQRAGVV AAASGISVCM ATGNSNAGVN GWYLSQILHK EYHSRLGFYG
> YDLQDQCGAS NSLSIRNDES SPLELRGPNY PNYA
> //
>
> ID Q6TWD8_9EURY PRELIMINARY; PRT; 374 AA.
> AC Q6TWD8;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 10.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS Methanobacterium aarhusense.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC Methanobacteriaceae; Methanobacterium.
> OX NCBI_TaxID=256826;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=H2-LR;
> RA Shlimon A.G., Friedrich M.W., Niemann H., Ramsing N.B., Finster K.;
> RT "Methanobacterium aarhusense sp. nov., a novel methanogen isolated
> RT from a marine sediment (Aarhus Bay, Denmark).";
> RL Int. J. Syst. Evol. Microbiol. 54:759-763(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY386125; AAR27839.1; -; Genomic_DNA.
> DR SMR; Q6TWD8; 1-374.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 374 374
> SQ SEQUENCE 374 AA; 40718 MW; 9F8E7CB126CA17D0 CRC64;
> VIVGLNTAHT VIEKRLGKEV TPETITHYLG NCNHAMPGAA VVQEHMVETN PSLVADSYVK
> IFTGNDEISD EVDQRFVINI NEEFPEEQAK VLKAEVGDGM WQVVKIPTIV SRTCDGGTTS
> RWSAMQIGMS MISAYKQAAG EAATGDFAYA AKHAEVVHMG TYLPVRRARG ENEPGGIAFG
> FLADICQSSR VNMDDPVRVA LDVVASGAML YDQIWLGSYM SGGVGFTQYA TAAYTDNILD
> DFTYYGKEYV EDKFGLCEAP NNMDTVLDVA SEVTFYGLEQ YEEYPALLET QFGGSQRAAV
> AAAAAACSTG FATGNAQTAL SGWYLSMYLH KEQHSRLGFY GYDLQDQCGA SNVFSIRGDE
> GLPLELRGAN YPNY
> //
>
> ID Q6T569_9EURY PRELIMINARY; PRT; 239 AA.
> AC Q6T569;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 10.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured Methanobacteriales archaeon.
> OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
> OC environmental samples.
> OX NCBI_TaxID=194842;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=14871211; DOI=10.1111/j.1462-2920.2004.00568.x;
> RA Newberry C.J., Webster G., Cragg B.A., Parkes R.J., Weightman A.J.,
> RA Fry J.C.;
> RT "Diversity of prokaryotes and methanogenesis in deep subsurface
> RT sediments from the Nankai Trough, Ocean Drilling Program Leg 190.";
> RL Environ. Microbiol. 6:274-287(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY436537; AAR36119.1; -; Genomic_DNA.
> DR SMR; Q6T569; 1-239.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 239 239
> SQ SEQUENCE 239 AA; 25871 MW; 2737778B60BA4F85 CRC64;
> MISAYNQCAG EGATGDFAYA SKHAEVIHMG TYLPVRRARA ENEPGGIAFG FLADMVQSTR
> VNPDDPVRSA LDVVAAGAAL YDQIWLGSYM SGGVGFTQYA SAAHTDNILD DFLYYGKEYV
> EDKFGICEAP NNMDTVLDVG SEVTFYGLEQ YEEYPALLET QFGGSQRASV VSAAAGCATA
> FATGNSQTGL SAWYLSMYLH KEQHSRLGFY GYDLQDQCGA SNVFSIRNDE GLPVEMRGP
> //
>
> ID Q6SIF9_9EURY PRELIMINARY; PRT; 160 AA.
> AC Q6SIF9;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 12.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured euryarchaeote.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=114243;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15528519; DOI=10.1128/AEM.70.11.6559-6568.2004;
> RA Castro H., Ogram A., Reddy K.R.;
> RT "Phylogenetic characterization of methanogenic assemblages in
> RT eutrophic and oligotrophic areas of the Florida Everglades.";
> RL Appl. Environ. Microbiol. 70:6559-6568(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY458420; AAR24541.1; -; Genomic_DNA.
> DR SMR; Q6SIF9; 2-160.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 160 160
> SQ SEQUENCE 160 AA; 17731 MW; BB46B7EBD0AEABC9 CRC64;
> DFTQYATAAY TDNILDDYTY YGMDYIKDKY KVDWKNPSEK GLAKANQDVI NDIATEVTLY
> GMEQYEQFPT ALETHFGGSQ RASVLAAASG LSTAIATGNS NAGLNGWYLS MLLHKEGWSR
> LGFYGYDLQD QCGSANTELF RADEGCVGEL RGANYPNYAM
> //
>
> ID Q6SEI7_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q6SEI7;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured euryarchaeote.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=114243;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15528519; DOI=10.1128/AEM.70.11.6559-6568.2004;
> RA Castro H., Ogram A., Reddy K.R.;
> RT "Phylogenetic characterization of methanogenic assemblages in
> RT eutrophic and oligotrophic areas of the Florida Everglades.";
> RL Appl. Environ. Microbiol. 70:6559-6568(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY459319; AAR24561.1; -; Genomic_DNA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 18115 MW; 3FF9CD3C09CBC441 CRC64;
> WCRFTQYATA AYTDNILDEY TYYGMDYIKD KYKVDWKNPN DKDKVKPTQD IANDMATEVA
> LNGMEQYEQF PTLMEDHFGG SQRAGVLAAA CGLTASIATG NSNAGLNAWY LCMLLHKEGW
> SRLGFFGYDL QDQCGSANSL AIRPDEGAIG ELRGPNYPNY AM
> //
>
> ID Q6SCJ1_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q6SCJ1;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured euryarchaeote.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=114243;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15528519; DOI=10.1128/AEM.70.11.6559-6568.2004;
> RA Castro H., Ogram A., Reddy K.R.;
> RT "Phylogenetic characterization of methanogenic assemblages in
> RT eutrophic and oligotrophic areas of the Florida Everglades.";
> RL Appl. Environ. Microbiol. 70:6559-6568(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY460215; AAR24565.1; -; Genomic_DNA.
> DR SMR; Q6SCJ1; 1-156.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 17088 MW; 427F985B2412A482 CRC64;
> GGVGFTQYAT AAYTDNVLDD YTYYGQDYVK DKYKGWTKAP QTQAAVNDIA TEVTLYGMEQ
> YENFPSLLED HFGGSQRASV LAAAAGLTCS MATANSNAGL NGWYLSMLLH KEGWSRLGFY
> GYDLQDQCGS ANCMAIRSDE GLITELRGAN YPNYAM
> //
>
> ID Q6MZC9_9ARCH PRELIMINARY; PRT; 589 AA.
> AC Q6MZC9;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 13.
> DE Adenine deaminase (EC 3.5.4.2).
> GN Name=adeC; ORFNames=C2_0013;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=14685246; DOI=10.1038/nature02207;
> RA Krueger M., Meyerdierks A., Gloeckner F.O., Amann R., Widdel F.,
> RA Kube M., Reinhardt R., Kahnt J., Boecher R., Thauer R.K., Shima S.;
> RT "A conspicuous nickel protein in microbial mats that oxidise methane
> RT anaerobically.";
> RL Nature 426:878-881(2003).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; BX649197; CAE46371.1; -; Genomic_DNA.
> DR GO; GO:0000034; F:adenine deaminase activity; IEA.
> DR GO; GO:0016787; F:hydrolase activity; IEA.
> DR GO; GO:0006146; P:adenine catabolism; IEA.
> DR InterPro; IPR006679; Adenine_deam.
> DR InterPro; IPR006680; Amidohydro_1.
> DR InterPro; IPR011550; Amidohydro_like.
> DR InterPro; IPR011059; Metal-dep_hydro_comp.
> DR Pfam; PF01979; Amidohydro_1; 1.
> DR ProDom; PD001248; Amidohydro_like; 1.
> DR TIGRFAMs; TIGR01178; ade; 1.
> KW Hydrolase.
> SQ SEQUENCE 589 AA; 64490 MW; 062BF973558662E9 CRC64;
> MASTNLLKMD PYLLIKFPKL KCQKMNALID IALGDKKADL VLKNVNLVNV CSGEIYETDI
> AIAHGLIAGL GRYEGRLEID AQDNYAVPGL IDGHTHIEMS MLSVREFAKA VVPRGTTAVV
> ADPHEIANVL GIAGIRALFD DARTTALKVF CMAPSCVPST DPSLGLETSG ATIDHTEIRK
> LLRMDGIIGL AEVMNYVGVI AKEEVVWEKI EIAKALKMPI DGHAPLLSGK ELNAYVVSGA
> GSDHENTTYE ESQEKLRLGM RVMVREGSVA KNLKKIVPLL RTVDTRNCML VTDGDRTPLD
> LKDEGYLDYV LRRAIEEGID PVKAVQMCTI NPAQWFKLDA EIGCIAPGKI ADIVLLKNLD
> TFEVEKVIVN GKPDFAQRSE YSFNYPQYRE SVRIMRVKPD EFVIEQEGAI KARIIGLIEG
> ELLTEELVEE ISGIEIARDI LEIGVLERHH YSGNMGLGFV KGFGLKIGAI ASTIAHDSHN
> IVVIGTDEED MALACNRLKD IGGGIVLCNG KEVTSELKLP IAGLMSDNGL DYVMRKQKEM
> DDNISEMGCK LPAPFIAISF LALPVIPKLK ITDKGLVDVA KREIVGVFL
> //
>
> ID Q6JIA4_9EURY PRELIMINARY; PRT; 160 AA.
> AC Q6JIA4;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured euryarchaeote.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=114243;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15528519; DOI=10.1128/AEM.70.11.6559-6568.2004;
> RA Castro H., Ogram A., Reddy K.R.;
> RT "Phylogenetic characterization of methanogenic assemblages in
> RT eutrophic and oligotrophic areas of the Florida Everglades.";
> RL Appl. Environ. Microbiol. 70:6559-6568(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY458406; AAR22531.1; -; Genomic_DNA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 160 160
> SQ SEQUENCE 160 AA; 17857 MW; 45AAC1637FA4A82E CRC64;
> DFTQYATAAY TDNILDEYTY YGMDYIKDKY KVDWKNPNEK DKVKPTQDIV NDMATEVALN
> GMEQYEQFPT LMEDHFGGSQ RAGVLAAACG LTTSIATGNS NAGLNAWYLC MLLHKEGWSR
> LGFFGYDLQD QCGSANSLAI RPDEGAIGEL RGPNYPNYAM
> //
>
> ID Q6JIA0_9EURY PRELIMINARY; PRT; 160 AA.
> AC Q6JIA0;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured euryarchaeote.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=114243;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15528519; DOI=10.1128/AEM.70.11.6559-6568.2004;
> RA Castro H., Ogram A., Reddy K.R.;
> RT "Phylogenetic characterization of methanogenic assemblages in
> RT eutrophic and oligotrophic areas of the Florida Everglades.";
> RL Appl. Environ. Microbiol. 70:6559-6568(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY458410; AAR22535.1; -; Genomic_DNA.
> DR SMR; Q6JIA0; 2-160.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 160 160
> SQ SEQUENCE 160 AA; 17638 MW; 41D7BC21326D12ED CRC64;
> DFTQYATAAY TDNILDDYTY YGMDYVKDKY KVDYKNPSEK GLAKSTQDVI NDIATEVTLY
> GMEQYEQFPT ALETHFGGSQ RASVLAAASG LSTAIATGNS NAGLNGWYLS MLLHKEGWSR
> LGFYGYDLQD QCGSANTESF RADEGAVGEL RGANYPNYAM
> //
>
> ID Q6JI97_9EURY PRELIMINARY; PRT; 162 AA.
> AC Q6JI97;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured euryarchaeote.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=114243;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15528519; DOI=10.1128/AEM.70.11.6559-6568.2004;
> RA Castro H., Ogram A., Reddy K.R.;
> RT "Phylogenetic characterization of methanogenic assemblages in
> RT eutrophic and oligotrophic areas of the Florida Everglades.";
> RL Appl. Environ. Microbiol. 70:6559-6568(2004).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY458413; AAR22538.1; -; Genomic_DNA.
> DR SMR; Q6JI97; 1-162.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 162 162
> SQ SEQUENCE 162 AA; 17550 MW; 9FE49DB657A17C6A CRC64;
> GGVGFTQYAT AAYTDDILDN NVYYDVDYIN QKYKGAAEVG KNNKIKATLD VVKDIATEST
> IYGIETYEKF PTALEDHFGG SQRATVLAAA AGVAIALATA NANAGLSGWY LSMYLHKEAW
> GRLGFFGYDL QDQCGATNVL SYQGDEGLPD ELRGPNYPNY AM
> //
>
> ID Q6ITY5_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q6ITY5;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured Methanosaeta sp.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
> OC Methanosaetaceae; Methanosaeta; environmental samples.
> OX NCBI_TaxID=183756;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15946291; DOI=10.1111/j.1462-2920.2004.00766.x;
> RA Banning N., Brock F., Fry J.C., Parkes R.J., Hornibrook E.R.,
> RA Weightman A.J.;
> RT "Investigation of the methanogen population structure and activity in
> RT a brackish lake sediment.";
> RL Environ. Microbiol. 7:947-960(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY625582; AAT45704.1; -; Genomic_DNA.
> DR SMR; Q6ITY5; 1-156.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16803 MW; 804C926EB4A05656 CRC64;
> GGVGFTQYAT AAYTNDVLDD FSYYACDYGV DKYGGWGEAP AVLDTSKDIA TETTLYAMEQ
> YEAFPTLLED HFGGSQRSAV MAAASAIGSA CLTGNSQSGL AGWYLSHLIH KDGWGRMGFF
> GYDLQDQCGP TNVFSYQGDE GSPLELRGAN YPNYAM
> //
>
> ID Q6ITY2_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q6ITY2;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured Methanomicrobiales archaeon.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;
> OC environmental samples.
> OX NCBI_TaxID=183760;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15946291; DOI=10.1111/j.1462-2920.2004.00766.x;
> RA Banning N., Brock F., Fry J.C., Parkes R.J., Hornibrook E.R.,
> RA Weightman A.J.;
> RT "Investigation of the methanogen population structure and activity in
> RT a brackish lake sediment.";
> RL Environ. Microbiol. 7:947-960(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY625585; AAT45707.1; -; Genomic_DNA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17935 MW; C7854F3AF24865F5 CRC64;
> GGVGFTQYAT AAYTDNILDE YTYYGMDYIK QKYKVDWANP AEKDKVKPTQ DIVNDIATEV
> ALNGMEQYEQ YPTLMEDHFG GSQRAGVLAA ACGLTCSIAT GNSNAGLNGW YLCMLLHKEG
> WSRLGFFGYD LQDQCGSANS LAIRPDEGAI GEFRGPNYSN YAM
> //
>
> ID Q6ITX6_9EURY PRELIMINARY; PRT; 163 AA.
> AC Q6ITX6;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured Methanomicrobiales archaeon.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;
> OC environmental samples.
> OX NCBI_TaxID=183760;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15946291; DOI=10.1111/j.1462-2920.2004.00766.x;
> RA Banning N., Brock F., Fry J.C., Parkes R.J., Hornibrook E.R.,
> RA Weightman A.J.;
> RT "Investigation of the methanogen population structure and activity in
> RT a brackish lake sediment.";
> RL Environ. Microbiol. 7:947-960(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY625591; AAT45713.1; -; Genomic_DNA.
> DR SMR; Q6ITX6; 1-163.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 163 163
> SQ SEQUENCE 163 AA; 17859 MW; 0B21BA1171B080C1 CRC64;
> GGVGFTQYAT AAYTDNILDD YTYYGMDYIK DKYKVDWKNP NEKGLAKSNQ DVINDIATEV
> TLYGMEQYEQ FPTALETHFG GSQRASVLAA ASGLSTAIAT GNSNAGLNGW YLSMLLHKEG
> WSRLGFFGYD LQDQCGSTNS LSVRPDEGAV GELRGPNYPN YAM
> //
>
> ID Q6ITX0_9EURY PRELIMINARY; PRT; 211 AA.
> AC Q6ITX0;
> DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2004, sequence version 1.
> DT 30-MAY-2006, entry version 10.
> DE Methyl-coenzyme M reductase alpha subunit (Fragment).
> GN Name=mcrA;
> OS uncultured Methanomicrobiales archaeon.
> OC Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;
> OC environmental samples.
> OX NCBI_TaxID=183760;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15946291; DOI=10.1111/j.1462-2920.2004.00766.x;
> RA Banning N., Brock F., Fry J.C., Parkes R.J., Hornibrook E.R.,
> RA Weightman A.J.;
> RT "Investigation of the methanogen population structure and activity in
> RT a brackish lake sediment.";
> RL Environ. Microbiol. 7:947-960(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY625597; AAT45719.1; -; Genomic_DNA.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 211 211
> SQ SEQUENCE 211 AA; 22996 MW; D6135CB3891F28BF CRC64;
> AAVADLAFAA KHAGVIQMGD ILPARRARGP NEPGGIKFGH FADMIQADRK YPNDPARATL
> EVVGAGAMLF DQIWLGSYMS GGVGFTQYAT AAYTDNILDD YTYYGMDYIK SKYKVNWQSP
> SEKDKVKATQ DVVNDIATEV NLYGMEQYEQ YPTALEDHFG GSQRASVLAA ASGISVSIAT
> GNSNAGLNGW YLSMLMHKEG WSRLGFFGYD L
> //
>
> ID Q69GZ5_METVO PRELIMINARY; PRT; 1199 AA.
> AC Q69GZ5;
> DT 13-SEP-2004, integrated into UniProtKB/TrEMBL.
> DT 13-SEP-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Chromosomal segregation protein.
> GN Name=SMC;
> OS Methanococcus voltae.
> OC Archaea; Euryarchaeota; Methanococci; Methanococcales;
> OC Methanococcaceae; Methanococcus.
> OX NCBI_TaxID=2188;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=PS;
> RA Feldman R., Overbeek R., Whitman W.;
> RT "Chromosomal segregation protein SMC.";
> RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY288521; AAQ22369.1; -; Genomic_DNA.
> DR GO; GO:0005694; C:chromosome; IEA.
> DR GO; GO:0005524; F:ATP binding; IEA.
> DR GO; GO:0016887; F:ATPase activity; IEA.
> DR GO; GO:0005525; F:GTP binding; IEA.
> DR GO; GO:0005515; F:protein binding; IEA.
> DR GO; GO:0051277; P:chromosome organization and biogenesis (sen...; IEA.
> DR InterPro; IPR003439; ABC_transp_like.
> DR InterPro; IPR005289; GTP_bd.
> DR InterPro; IPR010935; SMC_hinge.
> DR InterPro; IPR003395; SMC_N.
> DR InterPro; IPR011891; SMC_prok_A.
> DR Pfam; PF06470; SMC_hinge; 1.
> DR Pfam; PF02463; SMC_N; 1.
> DR ProDom; PD000006; ABC_transporter; 1.
> DR TIGRFAMs; TIGR00650; MG442; 1.
> DR TIGRFAMs; TIGR02169; SMC_prok_A; 1.
> SQ SEQUENCE 1199 AA; 137830 MW; 6BB179C2979CAA1D CRC64;
> MISISEIHLK NFKSFKNTKL KIPDGFTAIL GPNGSGKSNT IDGICFVLGK TSAKSLRAGK
> FNQLITYHNG KRADYAEVTL FFDNINREIP IDSDKVGICR KVKLNGDNNY YVVWYEVEKQ
> NTKINTESSQ KKTSKASKVE KRRRMKKNEV LDLLSKISLI ADGPNIILQG DLLRIIDTSP
> NERRKILDEV SGVAEFDEKS EKAKKELSQA REYIEKIDIR INEVRANLEK LKKEKEDAEK
> YTVYNKKLKV TKYILTSKKV EFLKMVLDET KDEIEALKET KNCYIQDISN IDSEIIGLKV
> KINELVNELN EKGSEEVMEL HKSIKELEVN LNNDKNALEN AIDDLKHTLK MEESKNNDLN
> ETKEKINNIR IDTLKKEAEA KVLIKEIEKL NEERQNLEKK VEQSESQVKA LKNQESKLSE
> RINDTQKELY GLKNELNQLE NTLNNRTFDY QKNNETIENL TNQIAEFSDL EDTKKLYKEL
> EDIAVELEFS KKKLQEKITE RNDSQSKLDN LHSEYVKENA RIKTLKDMEN FSLDRAVKGV
> LDAKLPGVVD IAGNLAKTKG EYKTAIEVAG GARLNHIVVK KMDDGSRAIN YLKQKRLGRA
> TFLPMDRIKG MDAKDISDTG IIGKAIDLVE FDIKYTNVFK FIFGNTHIVD NLENAKKLSL
> KYKARFVTLE GEVIEPSGAM VGGNIRRNSA IKVDIDMKKL TNLSEDIKEL EQILSNVKDE
> IERLNNKINT CSTRKLELDN RLKIARDQEF KKEEITKSNN LKIKELNMLN SKIDDEISEL
> TDEKEILSQK VQNLDNKLSE VMGQRERIVN EIKSYENSEL SKRIKEIDHK IRENESSKNT
> LENEIKKGAI LVKEVLIPKI SELNSNIKSL ADKKNMFKNS VEIYKSNIES NSSILSDKRG
> KYEELTKGLK DLTDKKECYE LEIENLQNNK EELREKATDI DNQVNVINVD RAKYETRLEE
> EERKLYLCDT LENIEDISDE MIEETYSLEI DDLERNQALL ESSIKKLEPV NMRAIEDYDF
> INERYEELFG KRKEYEQEEG KYLQLISEVQ KRKKETFMKT YDRVAENYEQ IYGEIGGNGK
> LSLENEEDPF SGGLLIDASP MNKQLQNLDV MSGGEKSLTA LAFLFAIQRL NPSPFYVLDE
> VDAALDTKNA SLIGDMISNA SKESQFIVIS HREQMISKSN VMYGVCMENG LSKIVSVKL
> //
>
> ID Q64EJ0_9ARCH PRELIMINARY; PRT; 169 AA.
> AC Q64EJ0;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 7.
> DE Carbon monoxide dehydrogenase beta subunit.
> GN Name=cdhC; ORFNames=GZ11A10_42;
> OS uncultured archaeon GZfos11A10.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285399;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714815; AAU82187.1; -; Genomic_DNA.
> DR GO; GO:0003824; F:catalytic activity; IEA.
> DR GO; GO:0008152; P:metabolism; IEA.
> DR InterPro; IPR003704; CO_DH_CoA_synth.
> DR Pfam; PF02552; CO_dh; 1.
> DR PIRSF; PIRSF006035; CO_dh_b_ACDS_e; 1.
> DR TIGRFAMs; TIGR00315; cdhB; 1.
> SQ SEQUENCE 169 AA; 18111 MW; 0D34595386D8A56A CRC64;
> MTRAYQCANV PGPHLGKVGT SASVASAIKR AKRPVLIVGS ELTNLDWALD LAKKQDIPVV
> ATAHVAGTMR EKGVDPDRVL GAIEITNLLK SPEWGGIRGE GQHDLAIFVD VKYYLEAQML
> STLKHFAPHI KTISLTKGHQ PNADQSLPNL SEKKLGKFLA GVVEGLAEG
> //
>
> ID Q64EE9_9ARCH PRELIMINARY; PRT; 565 AA.
> AC Q64EE9;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Adenine deaminase.
> GN Name=adeC; ORFNames=GZ11H11_35;
> OS uncultured archaeon GZfos11H11.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285398;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714816; AAU82228.1; -; Genomic_DNA.
> DR GO; GO:0000034; F:adenine deaminase activity; IEA.
> DR GO; GO:0016787; F:hydrolase activity; IEA.
> DR GO; GO:0006146; P:adenine catabolism; IEA.
> DR InterPro; IPR006679; Adenine_deam.
> DR InterPro; IPR006680; Amidohydro_1.
> DR InterPro; IPR011550; Amidohydro_like.
> DR InterPro; IPR011059; Metal-dep_hydro_comp.
> DR Pfam; PF01979; Amidohydro_1; 1.
> DR ProDom; PD001248; Amidohydro_like; 1.
> DR TIGRFAMs; TIGR01178; ade; 1.
> SQ SEQUENCE 565 AA; 61595 MW; CE23ED0096F61E64 CRC64;
> MNDLVDIASG NKKADLVLKN ANLVNVCSGE IYETDIAIAH GLIAGLGRYE GRVEIDAQDN
> YAVPGLIDGH THIEMSMLSV REFAKAVVPR GTTAVVADPH EIANVLGIAG IRALLDDART
> TALKVFCMAP SCVPSTDPSL GLETSGATLD HREIRKLLQM DGIIGLAEVM NYVGVIAKEE
> EVWEKIEIAK ALKMPIDGHA PLLSGKELNA YVVSGAGSDH ENTTYEESRE KLRLGMRVMV
> REGSVAKNLK NIAPLLRTVD TRNCMLVTDG DRTPLDLKDE GYLDYVLRRA IEEGIDPVKA
> VQMCTINPAQ WFKLDNIIGC IAPGKIADIV LLKKLDTFEV EKVIVNGKPD FAQRSEYSFK
> YPQYRESVRI MRVKPDEFVI AQEGAIKARI IGLIEGELLT EELVEEISGI EIARDILEIG
> VLERHHYSGN MGLGFVKGFG LKTGAIASTI AHDSHNIVVI GTNEEDMALA CNRLKAIGGG
> IVLCNGKEVT SELKLPIAGL MSDKGLDYVM RKQKEMDDSI SEMGCKLPAP FIAISFLALP
> VIPKLKITDK GLVDVAKREI VAVFL
> //
>
> ID Q64DQ6_9ARCH PRELIMINARY; PRT; 308 AA.
> AC Q64DQ6;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 7.
> DE Dolichol-P-glucose synthetase.
> GN ORFNames=GZ17F1_42;
> OS uncultured archaeon GZfos17F1.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285395;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714823; AAU82471.1; -; Genomic_DNA.
> DR InterPro; IPR005242; CHP374.
> DR Pfam; PF03706; UPF0104; 1.
> DR TIGRFAMs; TIGR00374; CHP374; 1.
> SQ SEQUENCE 308 AA; 33388 MW; FC3342236818F92B CRC64;
> MTSILAILIL FLIASIIGRA DIIDELRTAS PALIALSIPV YLISWPLRGI RYQQILAEIG
> VKEDLNFLVG CIAVSQSANV FLPARIGDVA RAYLLKKVKN ISWITGLSSL VVERMFDIIA
> ITVIGGFAVL GLRGMLLDQW VTDVITIAGL ATVTVFGILV LFLKLRTTIG GVIDRFIREI
> ALVSTNPRAF AIVLTGSLLV WLVDTLTCFV ILNAFSEQIS LSMIPVIFLA IAVGNLTKIF
> PITPGSIGPY EAVLTGIFSL GGIDTAIGFA AAVLDHFVKN LVTLILGRVY LSRFDLSWSQ
> LVEQSEQQ
> //
>
> ID Q64DQ1_9ARCH PRELIMINARY; PRT; 462 AA.
> AC Q64DQ1;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Tungsten formylmethanofuran dehydrogenase subunit A.
> GN Name=fwdA; ORFNames=GZ17G11_3;
> OS uncultured archaeon GZfos17G11.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285394;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714824; AAU82476.1; -; Genomic_DNA.
> DR GO; GO:0016787; F:hydrolase activity; IEA.
> DR InterPro; IPR006680; Amidohydro_1.
> DR InterPro; IPR011059; Metal-dep_hydro_comp.
> DR Pfam; PF01979; Amidohydro_1; 1.
> SQ SEQUENCE 462 AA; 52175 MW; 44E101B5EB9B5B27 CRC64;
> MAIQIRNGTV YDPANGIEGE KMDIFVDDGK IVDEIKPDEI IDATDKTVMA GGIDVHSHVA
> TYGLNLARFT FGFPTVGEIG YAYALMGYTH VNEPLMTLNT ASYVHHELSS IPLVDTSALI
> VLSLYDIDKE IREGDKASVK SALPLLLDLT KSIDIKIYDV RVRYAKKGFF YRDIDVTKCL
> KFFYELVEEP KILLRTYPEL LDEDTSVLRG FCMAHIGSGI GDDARYDAAI EILNKGGAVD
> LGIVSPYQDE AVNMRIGYRA ATEKFVSMDI GLEQPLIISE VDEKREGNNK SLRFALDALE
> YLPSSNISFS TDSPSGCLFS SYPKLFTWLL SRRNRKELMP DVEYSLYELA QITRTNPARQ
> LGLENKGHLG IGADADIAIY DMDENTGWRE LEKRLGNCSF LLKDGEAIIR EGKLNKERAR
> KKTFYFVPEV TEKAYESELI ERICNRRSFR AEHLRVDECF LH
> //
>
> ID Q64DN6_9ARCH PRELIMINARY; PRT; 510 AA.
> AC Q64DN6;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl coenzyme M reductase I subunit alpha.
> GN Name=mcrA; ORFNames=GZ18B6_1;
> OS uncultured archaeon GZfos18B6.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285363;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714825; AAU82491.1; -; Genomic_DNA.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> SQ SEQUENCE 510 AA; 56185 MW; 9716DE2F2CCC05F5 CRC64;
> MPQGQRFLMP YMMNHTDIMV NADDLHWINN AAMQQCWDDM KRGIVLGLDD AHGLLEARLG
> KEVTPDTISH YMEVLNHALP GGAVIQEHMV ETKPMLVNDS YAKIFTGDDD LADAVDRRFL
> LDINKEFAAG WEKPGEQADQ LKDAIGKKIW QVLWMPTVVG RMTDGGTMFR WVGMQVGMTM
> ISAYKLCAGE SVTGEFAYYA KHAAVVQLSN YMPVKRARAH NEPGGMPLGI NADSVRSNAL
> FPNDPIRNEL ESIAVAAMVY DQLWFGTYMS GGVGFTQYAS ATYTDNILED FCYKGCEIGL
> DYAGGEMASI KGDKLNMDIL EEIIRAENDY ALTQYEAYPT VAESHFGGSV RACCAAAGCG
> SAVACATGLA QPTLSAWSLS QLGHYERKGR LGFFGYDLQD QCTACGSYSY QSDEGMPFEM
> RGVNYPNYAM NVGHQSAYGG LVAGAHCANH DAWVLSPLWK VAFSDRDLPF DRGYVTREYG
> LGANREYTKV AGERDLIIAG YYGREPGAKL
> //
>
> ID Q64C70_9ARCH PRELIMINARY; PRT; 561 AA.
> AC Q64C70;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl coenzyme M reductase subunit alpha.
> GN Name=mcrA; ORFNames=GZ26B2_4;
> OS uncultured archaeon GZfos26B2.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285406;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714839; AAU83007.1; -; Genomic_DNA.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> SQ SEQUENCE 561 AA; 61463 MW; C30CF6E30A992C71 CRC64;
> MAYKYPSEKI FVEALKAKFA GLDLADQKTR YVRAGFVQNA RKREFQAAGM RVAEQRGIKQ
> YDVNVHLGGM TLGQRQLVPY KLSTQPDIVE GDDLHYVNNP AMQQMWDDMK RTIIVGMDLA
> HETLEKRLGK EVTPESIAGY MEAVNHTMPG AAIVQEHMVE THPGLVDDCY VKMFTGDDEL
> ADEIDSQYVI NINDLFDKEG QNEKIKAAIG KTTWQAIHIP TIVVRCCDGG NTSRWSAMQL
> GMSYIAAYNM CAGEAAVADL AFAAKHAAAV QMAEMLPARR ARSPNEPGGL SFGYCADMVQ
> KMRVKPDDPV LYTLEVVACG TMLYDQIWLG SYMSGGVGFT QYATAAYTND VLDDFTYYGY
> DYALNKFGPD GTAPNDLATA TDLATEVTLN GMECYEDYPT LLEDHFGGSQ RAGILAAASA
> CTTGIATGNA QVALSAWYMS MYVHKEGWGR LGFFGYDLQD QCGATNVCSY QGDEGCCLEL
> RGANYPNYAM NVGHQGEYAG FTGAAHAGAH DAYCCNPLIK VCFADPSLVF DFADIRKEYA
> RGAMRTFRPA GERSLVIPAG V
> //
>
> ID Q64BR7_9ARCH PRELIMINARY; PRT; 332 AA.
> AC Q64BR7;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Ketol-acid reductoisomerase.
> GN ORFNames=GZ26G2_30;
> OS uncultured archaeon GZfos26G2.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285389;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714843; AAU83160.1; -; Genomic_DNA.
> DR GO; GO:0016853; F:isomerase activity; IEA.
> DR GO; GO:0004455; F:ketol-acid reductoisomerase activity; IEA.
> DR GO; GO:0009082; P:branched chain family amino acid biosynthesis; IEA.
> DR InterPro; IPR013023; AcH_isomrdctse.
> DR InterPro; IPR000506; AcH_isomrdctse_C.
> DR InterPro; IPR013116; IlvN.
> DR Pfam; PF01450; IlvC; 1.
> DR Pfam; PF07991; IlvN; 1.
> DR TIGRFAMs; TIGR00465; ilvC; 1.
> KW Isomerase.
> SQ SEQUENCE 332 AA; 36857 MW; D5904ACF0CB78E4D CRC64;
> MEILHDEDVD DSILRDKTIA VMGYGAQGDA QANCLKDSGI NVVIGETEIL GGNKNPSWEK
> AKEDGFEVLP IDKAAEKGDV VHILLPDEVQ PAIYENQIKP QLKAGKALCF SHGFNICFKR
> IVPPEDVDVI MVAPKAPGTE ERKAYLEGFG VPGLVAVKQN PSGEAREVAL AMTKAMHWTK
> AGILECTFEQ ETYEDLFGEQ CVLCGGLVEL MRNGFEVLVE AGYPPEMAYF ECVHEMKLIV
> DLVWQGGIKR MAEVISNTAE YGMWAVGHQI IGPEVKEKMK EALKRVENGE FANEWVDEYK
> RGIPFLKASR EKMGEHQVET VGAEIRKLFA QK
> //
>
> ID Q64BA0_9ARCH PRELIMINARY; PRT; 215 AA.
> AC Q64BA0;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Tungsten formylmethanofuran dehydrogenase subunit A.
> GN Name=fwdA; ORFNames=GZ27E7_1;
> OS uncultured archaeon GZfos27E7.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285383;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714847; AAU83327.1; -; Genomic_DNA.
> DR InterPro; IPR013108; Amidohydro_3.
> DR InterPro; IPR011059; Metal-dep_hydro_comp.
> DR Pfam; PF07969; Amidohydro_3; 1.
> SQ SEQUENCE 215 AA; 24158 MW; 23A47E5E6B10C395 CRC64;
> MYSGKSPVNT IQWAIGQELA LLVKDPWKVA LTTDHPNAGP FIGYPIIISM LMSKKRRDES
> AEDMHKVIFD RAIYPSIDRE YDLYEIAIIT RGMAAKALGL HEHGKGHLGV GADGDVAIYD
> MSPEERDAGK IQKAFLNTKY TIKGGQIVVK DGEVVATPDG KTYFVTPECD DTLTDEMMVK
> LKDKFDHYYS VTYNNYAVQD AYVPNPYEIK APWRS
> //
>
> ID Q64AT2_9ARCH PRELIMINARY; PRT; 225 AA.
> AC Q64AT2;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 6.
> DE Hypothetical protein.
> GN ORFNames=GZ29E12_7;
> OS uncultured archaeon GZfos29E12.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285380;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714851; AAU83495.1; -; Genomic_DNA.
> DR InterPro; IPR013216; Methyltransf_11.
> DR Pfam; PF08241; Methyltransf_11; 1.
> KW Hypothetical protein.
> SQ SEQUENCE 225 AA; 25282 MW; A3479529FFAFADA0 CRC64;
> MGKIPIFEDG AEEYDKWFDE NPFAYKSEVL ALGKFIPKNS KGLEVGVGTG RFAAPMGIQM
> GVEPARAMAD IARKRGIEVY EAKAEELPFD NESFDFILMA TTICFLQNPM LALQESTRVI
> KSGGYIIIGM IDSDSFLGKA YESKKKDSKF YRYAHFYSVN QVLKWVRKLG YCHIKICQTI
> FKNPGKITAT EPVKDGSGRG GFVVISAQKD VRLDFHPDHV RRSLS
> //
>
> ID Q64AN1_9ARCH PRELIMINARY; PRT; 568 AA.
> AC Q64AN1;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 11.
> DE Adenine deaminase.
> GN Name=adeC; ORFNames=GZ30H9_33;
> OS uncultured archaeon GZfos30H9.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285372;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714852; AAU83546.1; -; Genomic_DNA.
> DR GO; GO:0000034; F:adenine deaminase activity; IEA.
> DR GO; GO:0016787; F:hydrolase activity; IEA.
> DR GO; GO:0006146; P:adenine catabolism; IEA.
> DR InterPro; IPR006679; Adenine_deam.
> DR InterPro; IPR006680; Amidohydro_1.
> DR InterPro; IPR011550; Amidohydro_like.
> DR InterPro; IPR011059; Metal-dep_hydro_comp.
> DR Pfam; PF01979; Amidohydro_1; 1.
> DR ProDom; PD001248; Amidohydro_like; 1.
> DR TIGRFAMs; TIGR01178; ade; 1.
> SQ SEQUENCE 568 AA; 62160 MW; 182260FF0D5B4F01 CRC64;
> MTKMNDLVDI ALGNKKADLV LKNVNLVNVC SGEIYETDIA IAHDVIAGLG RYEGRLEIDA
> QDNYAVPGLI DGHTHIEMSM LSVREFAKAV VPRGTTAVVA DPHEIANVLG IAGIRALLDD
> ARTTALKVFC MAPSCVPSTD PSLGLETSGA MIDHTEIRKL LRMDGIIGLA EVMNYVGVIA
> KEEEVWEKIE IAKALKMPID GHAPLLSGKE LNAYVVSGAG SDHENTTYEE SEEKLRLGMR
> VMVREGSVAK NLKNIAPLLR TVDTRNCMLV TDGDRTPLDL KDEGYLDYVL RRAIEEGIDP
> VKAVQMCTIN PAQWFKLDAE IGCIAPGKIA DIVLLKKLDT FEVEKVIVNG KPDFAQRSEY
> SFNYPHYRES VRIMRVKPDE FVIEQEGAIK ARIIGLIEGE LQTEELVEEI SGIEIARDIL
> EICVLERHHY SGNMGLGFVK GFGLKTGAIA STIAHDSHNI VVIGTNEEDM AVACNRLKDI
> GGGIVLCNGE EVTSELKLPI AGLMSDNGLD YVMRKQKEMD DNISEMGCKL PAPFIAISFL
> ALPVIPKLKI TDKGLVDVAK REIVGVFL
> //
>
> ID Q649Z7_9ARCH PRELIMINARY; PRT; 449 AA.
> AC Q649Z7;
> DT 25-OCT-2004, integrated into UniProtKB/TrEMBL.
> DT 25-OCT-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl coenzyme M reductase subunit beta.
> GN Name=mcrB; ORFNames=GZ33H6_29;
> OS uncultured archaeon GZfos33H6.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=285376;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15353801; DOI=10.1126/science.1100025;
> RA Hallam S.J., Putnam N., Preston C.M., Detter J.C., Rokhsar D.,
> RA Richardson P.M., DeLong E.F.;
> RT "Reverse methanogenesis: testing the hypothesis with environmental
> RT genomics.";
> RL Science 305:1457-1462(2004).
> RN [2]
> RP NUCLEOTIDE SEQUENCE.
> RA Putnam N., Detter J.C., Richardson P.M., Rokhsar D.;
> RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY714858; AAU83780.1; -; Genomic_DNA.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR003179; MCR_beta.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02241; MCR_beta; 1.
> DR Pfam; PF02783; MCR_beta_N; 1.
> DR PIRSF; PIRSF000263; Meth_CoM_rd_beta; 1.
> SQ SEQUENCE 449 AA; 48001 MW; 88711BD50CEBBFB9 CRC64;
> MYSMMCRVSE ISKEEKKNMA DEIDLYDDRG SVLAKGVPLQ AISPLKNAAM RKIVNLTIRT
> GAVDLAGLEK KLKTGAIAGR GMVIRGVAKD LPILDKASTI AGEVEEMLRI ESGDDTEVTL
> MSGEKRMLIQ VPTARILADY SVGLTAAMGA LTHAIIDVCD VSMWDAPYVH AAVWGMYPQN
> PDPADGAVKM LVDIPMKNEG PGFTLRNIPV NHLAATVRKR AIQGAALTMI LEEAAQFEMG
> NCMGPHERGH LLDLAYEGLN ANNLLYNLVK DNGKGTLADV VYGLVEKAKA DGVIKPKKKM
> GSGYVVYEAD DPQLWNAYAS AGLLAAVCVN CGAMRAGQSV PGCIMYYNVL LEHETGMPGV
> DYGMTQGASV SSSFFSHSIY GGGGPGVFYG NHIVTRHPKG QFIPCFCASM CLDADTMYFS
> PARTSALYGE VLGAIPEFAE PMKAVAGAV
> //
>
> ID Q5W1H7_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q5W1H7;
> DT 07-DEC-2004, integrated into UniProtKB/TrEMBL.
> DT 07-DEC-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl-coenzyme M reductase, subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Juottonen H., Galand P.E., Tuittila E.S., Laine J., Fritze H.,
> RA Yrjala K.;
> RT "Methanogen communities and Bacteria along an ecohydrological gradient
> RT in a northern raised bog complex.";
> RL Environ. Microbiol. 7:1547-1557(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ853818; CAH68737.1; -; Genomic_DNA.
> DR SMR; Q5W1H7; 1-156.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16826 MW; 933E29E6D0D3479E CRC64;
> GGVGFTQYAT AAYTNDVLDD FCYYTVDYAN DKYGGFAKAP ATLEVAKDIA TESTLYSAEQ
> YESFPTLLED HFGGSQRASV MAAASGIGAA IASGHSQIGL AGWYLSMLLH KEAWGRLGFF
> GYDLQDQCGP TNVFSYQSDE GNPTELRGAN YPNYAM
> //
>
> ID Q5W1G6_9EURY PRELIMINARY; PRT; 155 AA.
> AC Q5W1G6;
> DT 07-DEC-2004, integrated into UniProtKB/TrEMBL.
> DT 07-DEC-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl-coenzyme M reductase, subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Juottonen H., Galand P.E., Tuittila E.S., Laine J., Fritze H.,
> RA Yrjala K.;
> RT "Methanogen communities and Bacteria along an ecohydrological gradient
> RT in a northern raised bog complex.";
> RL Environ. Microbiol. 7:1547-1557(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ853829; CAH68748.1; -; Genomic_DNA.
> DR SMR; Q5W1G6; 1-155.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 155 155
> SQ SEQUENCE 155 AA; 16687 MW; BFF954EC7783321D CRC64;
> GGVGFTQYAT AAYTDNILDD YSYYGNDYAK KYGADGKAPS TMDVVNDLGT EVTLYGIEQY
> EKYPTTLEDH FGGSQRATVL AAASGVTAAI ATGNSNAGLS AWYLSMLLHK DAWGRLGFYG
> YDLQDQCGST NTFSVRSDEG APDELRGANY PNYAM
> //
>
> ID Q5W1G5_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q5W1G5;
> DT 07-DEC-2004, integrated into UniProtKB/TrEMBL.
> DT 07-DEC-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl-coenzyme M reductase, subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Juottonen H., Galand P.E., Tuittila E.S., Laine J., Fritze H.,
> RA Yrjala K.;
> RT "Methanogen communities and Bacteria along an ecohydrological gradient
> RT in a northern raised bog complex.";
> RL Environ. Microbiol. 7:1547-1557(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ853830; CAH68749.1; -; Genomic_DNA.
> DR SMR; Q5W1G5; 1-156.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16861 MW; 01CD98138E827CCC CRC64;
> GGVGFTQYAT AAYTDSILDD YCYYGLDYIK AKHGGLGKAK KTQEVLNDIA TEVTLYGMEQ
> YEQYPTTLES HFGGSQRASV LAAAAGISCA PATANSNAGL NGWYMSMLAH KEGWSRLGFF
> GYDLQDQCGS TNSMSIRPDE GCIGELRGPN YPNYAM
> //
>
> ID Q5W1G4_9EURY PRELIMINARY; PRT; 156 AA.
> AC Q5W1G4;
> DT 07-DEC-2004, integrated into UniProtKB/TrEMBL.
> DT 07-DEC-2004, sequence version 1.
> DT 30-MAY-2006, entry version 8.
> DE Methyl-coenzyme M reductase, subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Juottonen H., Galand P.E., Tuittila E.S., Laine J., Fritze H.,
> RA Yrjala K.;
> RT "Methanogen communities and Bacteria along an ecohydrological gradient
> RT in a northern raised bog complex.";
> RL Environ. Microbiol. 7:1547-1557(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ853831; CAH68750.1; -; Genomic_DNA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 156 156
> SQ SEQUENCE 156 AA; 16855 MW; 7B44DA99BF5C1A14 CRC64;
> GGVGFTQYAT ATYTDNILDD MCYNIADYVK KKYGGFTKAK VSMDTILDVA TEATEYGLDQ
> YDMYPTLAET HFGGSQRTSV VSASAGVGVS LATGRAQAGV NGWYLSEILH KEIAGRLGFY
> GYDAQDQMGA ANSFAFRGDE GLPMELRGPN YPNYAM
> //
>
> ID Q5TIW9_9EURY PRELIMINARY; PRT; 155 AA.
> AC Q5TIW9;
> DT 21-DEC-2004, integrated into UniProtKB/TrEMBL.
> DT 21-DEC-2004, sequence version 1.
> DT 30-MAY-2006, entry version 7.
> DE Methyl-coenzyme M reductase, subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Juottonen H., Galand P.E., Tuittila E.S., Laine J., Fritze H.,
> RA Yrjala K.;
> RT "Methanogen communities and Bacteria along an ecohydrological gradient
> RT in a northern raised bog complex.";
> RL Environ. Microbiol. 7:1547-1557(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ862825; CAH89321.1; -; Genomic_DNA.
> DR SMR; Q5TIW9; 1-155.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 155 155
> SQ SEQUENCE 155 AA; 16685 MW; A4EB54EB3E1D9469 CRC64;
> GGVGFTQYAT AAYTDNILDD YAYYGNDYAK KYGADGKAPA TMDVVNDLGT EVTLYGIEQY
> EKYPTTLEDH FGGSQRATVL AAASGVTTAI ATGNSNAGLS AWYLSMLLHK DAWGRLGFYG
> YDLQDQCGST NTFSVRSDEG APDELRGANY PNYAM
> //
>
> ID Q5NVZ6_9ARCH PRELIMINARY; PRT; 400 AA.
> AC Q5NVZ6;
> DT 04-JAN-2005, integrated into UniProtKB/TrEMBL.
> DT 04-JAN-2005, sequence version 1.
> DT 30-MAY-2006, entry version 9.
> DE Eukaryotic type DNA primase, small subunit (EC 2.7.7.-).
> GN Name=priA; ORFNames=orf10;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=16329940; DOI=10.1016/j.femsec.2004.12.004;
> RA Erkel C., Kemnitz D., Kube M., Ricke P., Chin K.-J., Dedysh S.,
> RA Reinhardt R., Conrad R., Liesack W.;
> RT "Retrieval of first genome data for rice cluster I methanogens by a
> RT combination of cultivation and molecular techniques.";
> RL FEMS Microbiol. Ecol. 53:187-204(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; CR626857; CAH04810.1; -; Genomic_DNA.
> DR GO; GO:0003896; F:DNA primase activity; IEA.
> DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA.
> DR GO; GO:0016740; F:transferase activity; IEA.
> DR GO; GO:0006269; P:DNA replication, synthesis of RNA primer; IEA.
> DR InterPro; IPR002755; DNA_primase_S.
> DR PANTHER; PTHR10536; DNA_primase_S; 1.
> DR Pfam; PF01896; DNA_primase_S; 2.
> DR PIRSF; PIRSF005538; DNA_primase_S; 1.
> DR TIGRFAMs; TIGR00335; primase_sml; 1.
> KW Nucleotidyltransferase; Transferase.
> SQ SEQUENCE 400 AA; 45530 MW; 482EDC1DAB000E66 CRC64;
> MNDQTRAFLR ERFRDYYSRS KVFVPPGLAQ REWGFIFHEE TVGVAMRRHK AFNSEGELAD
> YLRSMPPAHA YHSAAYYRHP QAPTMQEKDW LGADLIFDLD ADHLPGVKNM TYGEMLDNVK
> VEIIRLIDEF LIDDLGFREK DMDIVFSGGR GYHVHVRDER VRTLKSPERR EIVDYLLGTG
> LEPDRMFIRT NQRIDTGTTS VAGVWLIRGF DSVPGGWDRR VARHIVEKLD QIGRLPDKDA
> KEALRAFSLE SKDVKRILHV ARDPASLQKI REKGLIELSG NLEGFFRSIL AGTIDQFKVS
> LAGKTDEPVT ADIKRLIRLP GSIHGGSSFR VTPLTRAQLE SFNPLEDAII FSDDPVRVLV
> TRPAVVEMKG KIYRVSEGVG RLPENVAMFL MCRGSADYEP
> //
>
> ID Q5IEN3_9ARCH PRELIMINARY; PRT; 240 AA.
> AC Q5IEN3;
> DT 15-FEB-2005, integrated into UniProtKB/TrEMBL.
> DT 15-FEB-2005, sequence version 1.
> DT 30-MAY-2006, entry version 7.
> DE Methyl coenzyme-M reductase (Fragment).
> GN Name=mcrA;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15746419; DOI=10.1126/science.1102556;
> RA Kelley D.S., Karson J.A., Fruh-Green G.L., Yoerger D.R., Shank T.M.,
> RA Butterfield D.A., Hayes J.M., Schrenk M.O., Olson E.J.,
> RA Proskurowski G., Jakuba M., Bradley A., Larson B., Ludwig K.,
> RA Glickson D., Buckman K., Bradley A.S., Brazelton W.J., Roe K.,
> RA Elend M.J., Delacour A., Bernasconi S.M., Lilley M.D., Baross J.A.,
> RA Summons R.E., Sylva S.P.;
> RT "A serpentinite-hosted ecosystem: the Lost City hydrothermal field.";
> RL Science 307:1428-1434(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY760635; AAW31860.1; -; Genomic_DNA.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 240 240
> SQ SEQUENCE 240 AA; 25826 MW; A0C50445B5347CC7 CRC64;
> QIGMSFINAY KMCAGESATR EFAFMAKHAS VVQMANYMPV RRARATSELG GLPLGITCDM
> TRSPALFPND PVRAALESIA DGALLLDQLW FGTYMSGGVG FTQYASATYT DNILEDFCYK
> AEEIAIDMFG DHCAAEPTME NIEKLVRAES EYCLTQYEAY PTVAESHFGG SVRAACQSAG
> AAVAVACATG SADAALNGWA LAQLLHYASV GRLGFYGYDL QDQCTSSTSF SYRSDEGLPF
> //
>
> ID Q5IEN2_9ARCH PRELIMINARY; PRT; 242 AA.
> AC Q5IEN2;
> DT 15-FEB-2005, integrated into UniProtKB/TrEMBL.
> DT 15-FEB-2005, sequence version 1.
> DT 30-MAY-2006, entry version 7.
> DE Methyl coenzyme-M reductase (Fragment).
> GN Name=mcrA;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15746419; DOI=10.1126/science.1102556;
> RA Kelley D.S., Karson J.A., Fruh-Green G.L., Yoerger D.R., Shank T.M.,
> RA Butterfield D.A., Hayes J.M., Schrenk M.O., Olson E.J.,
> RA Proskurowski G., Jakuba M., Bradley A., Larson B., Ludwig K.,
> RA Glickson D., Buckman K., Bradley A.S., Brazelton W.J., Roe K.,
> RA Elend M.J., Delacour A., Bernasconi S.M., Lilley M.D., Baross J.A.,
> RA Summons R.E., Sylva S.P.;
> RT "A serpentinite-hosted ecosystem: the Lost City hydrothermal field.";
> RL Science 307:1428-1434(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY760636; AAW31861.1; -; Genomic_DNA.
> DR SMR; Q5IEN2; 1-234.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 242 242
> SQ SEQUENCE 242 AA; 26091 MW; 87DF2FF18E27E82D CRC64;
> SYSMCAGEAA VADLSYAAKH AGVIQMGDML PARRARSPNE PGGVSFGHLA DIIQTSRVKS
> DDPTKVALEV IGAGCMLYDQ IWLGSYMSGR VGFTQYATAA YTDNILDDNM YYMVDYINEK
> YNGAADKGVD NKVEATLDVV KDIATESTLY GLENYELYPT TLESHFGGSQ RATVLSAAAG
> CSTSLATGNG NAGLSGWYLS MYLHKEAHGR LGFYGYDLQD QCGAANVFSY QSDEDCLLNF
> VV
> //
>
> ID Q5IEM9_9ARCH PRELIMINARY; PRT; 242 AA.
> AC Q5IEM9;
> DT 15-FEB-2005, integrated into UniProtKB/TrEMBL.
> DT 15-FEB-2005, sequence version 1.
> DT 30-MAY-2006, entry version 7.
> DE Methyl coenzyme-M reductase (Fragment).
> GN Name=mcrA;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=15746419; DOI=10.1126/science.1102556;
> RA Kelley D.S., Karson J.A., Fruh-Green G.L., Yoerger D.R., Shank T.M.,
> RA Butterfield D.A., Hayes J.M., Schrenk M.O., Olson E.J.,
> RA Proskurowski G., Jakuba M., Bradley A., Larson B., Ludwig K.,
> RA Glickson D., Buckman K., Bradley A.S., Brazelton W.J., Roe K.,
> RA Elend M.J., Delacour A., Bernasconi S.M., Lilley M.D., Baross J.A.,
> RA Summons R.E., Sylva S.P.;
> RT "A serpentinite-hosted ecosystem: the Lost City hydrothermal field.";
> RL Science 307:1428-1434(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY760639; AAW31864.1; -; Genomic_DNA.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 242 242
> SQ SEQUENCE 242 AA; 25984 MW; 26DB7A0FE1509985 CRC64;
> MSFINAYKMC AGESATGEFA FMAKHASVVQ MANYMPVRRA RATNELGGLP LGITCDMTRS
> PALFPNDPVR AALESIAVGA LLLDQLWFGT YMSGGVGFTQ YASATYTDNI LEDFCYKAEE
> IAIDMFGDHC AAEPTMENIE KLVRAESEYC LTQYEAYPTV AESHFGGSVR AACQSAGAAV
> AVACATGSAD AALNGWALAQ LLHYASVGRL GFYGYDLQDQ CTSSTSFSYR SDEGLPFEMR
> GA
> //
>
> ID Q5EGK4_9EURY PRELIMINARY; PRT; 256 AA.
> AC Q5EGK4;
> DT 15-MAR-2005, integrated into UniProtKB/TrEMBL.
> DT 15-MAR-2005, sequence version 1.
> DT 30-MAY-2006, entry version 6.
> DE McrA (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RA Kormas K.A., Meziti A., Dahlman A., de Lange G., Lykousis V.;
> RT "Molecular fingerprinting of methanogens in eastern Mediterranean Sea
> RT mud volcanoes.";
> RL Geochim. Cosmochim. Acta 69:A77-A77(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY883171; AAW80300.1; -; Genomic_DNA.
> DR SMR; Q5EGK4; 1-256.
> DR GO; GO:0016782; F:transferase activity, transferring sulfur-c...; IEA.
> DR GO; GO:0015948; P:methanogenesis; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR InterPro; IPR003183; MCR_alpha_N.
> DR InterPro; IPR009024; MCR_fer_like.
> DR Pfam; PF02249; MCR_alpha; 1.
> DR Pfam; PF02745; MCR_alpha_N; 1.
> FT NON_TER 1 1
> FT NON_TER 256 256
> SQ SEQUENCE 256 AA; 27697 MW; 37D4C4F5C8AE04C2 CRC64;
> AMQIGMSFIS SYHMCAGEAA VADLAFTAKH AGLVEMSEML PARRARGPNE PGGLSFGHMC
> DIVQTSRKFR DDPCKIALET CAAAMMLYDQ IWLGGYMSGG VGFTQYATSA YTNNTVDDNL
> YADTEYGWDT FGTSIGDCKA PSIDIIRDMG TWGALYGLEL YENYPTALED HFGGSQRATV
> ISTATGAACA ITTGNSNAGL SAWYLSMYLH KEAHGRLGFF GYDLQDQCGA TNVFSYQSDE
> GLLAEMRGAN YPNYAM
> //
>
> ID Q573A6_9ARCH PRELIMINARY; PRT; 201 AA.
> AC Q573A6;
> DT 10-MAY-2005, integrated into UniProtKB/TrEMBL.
> DT 10-MAY-2005, sequence version 1.
> DT 30-MAY-2006, entry version 6.
> DE Methyl-coenzyme M reductase alpha subunit (EC 2.8.4.1) (Fragment).
> GN Name=mcrA;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=16034418; DOI=10.1038/nature03796;
> RA Webster G., Parkes J., Cragg B.A., Weightman A.J., Newberry C.J.,
> RA Ferdelman T., Kallmeyer J., Jorgensen J., Aiello B.B., Fry J.C.;
> RT "Deep sub-seafloor prokaryotes stimulated at interfaces over
> RT geological time.";
> RL Nature 436:390-394(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AJ867766; CAI30322.1; -; Genomic_DNA.
> DR SMR; Q573A6; 1-197.
> DR GO; GO:0050524; F:coenzyme-B sulfoethylthiotransferase activity; IEA.
> DR GO; GO:0016740; F:transferase activity; IEA.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> KW Transferase.
> FT NON_TER 1 1
> FT NON_TER 201 201
> SQ SEQUENCE 201 AA; 21402 MW; 8D267F2311353444 CRC64;
> VSMGEMLPAR RARGPNEPGG LSFGHLSDII QASRVSKDPA KIALEVVGAG CMLYDQIWLG
> SYMSGGVGFT QYATAAYTDD ILDNNVYYDV DYINDKYNGA ANVGKDNKVK ASLDVVKDIA
> TESTLYGIET YEKFPTALED HFGGSQRATV LAAAAGVACS LATANANAGL SGWYLSMYLH
> KEAWGKLGSF GFDLQDQCGA P
> //
>
> ID Q4U340_9ARCH PRELIMINARY; PRT; 613 AA.
> AC Q4U340;
> DT 05-JUL-2005, integrated into UniProtKB/TrEMBL.
> DT 05-JUL-2005, sequence version 1.
> DT 30-MAY-2006, entry version 5.
> DE Alpha glucosidase (Fragment).
> OS archaeon #33-9.
> OC Archaea.
> OX NCBI_TaxID=328513;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RC STRAIN=#33-9;
> RA Ng C.C., Shyu Y.T.;
> RT "Thermo-stable protein alpha glucosidase translated from cell-free
> RT expression system from thermophile.";
> RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; DQ017387; AAY42612.1; -; Genomic_DNA.
> DR GO; GO:0004339; F:glucan 1,4-alpha-glucosidase activity; IEA.
> DR GO; GO:0005976; P:polysaccharide metabolism; IEA.
> DR InterPro; IPR008928; 6hp_glycosidase.
> DR InterPro; IPR011613; Glyco_hydro_15_rel.
> DR InterPro; IPR012343; Glyco_trans_sub.
> DR Pfam; PF00723; Glyco_hydro_15; 1.
> FT NON_TER 1 1
> SQ SEQUENCE 613 AA; 71334 MW; 32E033F5BF8C4D8B CRC64;
> RMLINFDEKG RIVDIYYPYI GMENQTSGNP IRLAIWDKDK NTISLDEEWE TTVLYLDEAN
> MVEIRSDIRK LGLSLLSYNF LDPDDPIYMS IIKVANNENN NRNIKIFFIH DINLYSNPFG
> DTAFYDPLSL SIVHYKSKRY LAFKVFTTTS IFSEYNVGKG DLIGDIYDGN LGLNGIENGD
> VNSSMGIEAN IDPNSYVNLY YVIVADRNLE DLRQKIRKIN FANVETSFTL TYMFWRNWLK
> KNKLFRNSLM QDIKRVYDVS LFVIRNHMDI NGSIIASSDF SFVKIYGDSY QYCWPRDAAI
> AAYALDLAGY KELALRHFQF ISNIVNSEGF LYHKYNPNTT LASSWHPWFY KGKRIYPIQE
> DETALEVWAI VSHYEKYEDI DEILPLYKKF VKPALKFMMS FMEEGLPKPS FDLWEERYGI
> HIYTVSTVYG ALTKGAKLAY DVGDEILSED LSDTSGLLKG MVLKRMTYNG RFIRRIDEEN
> NQDLTVDSSL YAPFFFGLVD ANDKIMINTI NEIENKLTVN GGVIRYENDM YQRRKKQPNP
> WIITTLWLAE YYATINDKNK ANEYIKWVIN RALPTGFLPE QVDPETFEPT SVTPLVWSHA
> EFIIAINKLL NHI
> //
>
> ID Q4QXS4_9EURY PRELIMINARY; PRT; 154 AA.
> AC Q4QXS4;
> DT 19-JUL-2005, integrated into UniProtKB/TrEMBL.
> DT 19-JUL-2005, sequence version 1.
> DT 30-MAY-2006, entry version 6.
> DE Methyl-coenzyme M reductase subunit A (Fragment).
> GN Name=mcrA;
> OS uncultured methanogenic archaeon.
> OC Archaea; Euryarchaeota; environmental samples.
> OX NCBI_TaxID=198240;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=16329940; DOI=10.1016/j.femsec.2004.12.004;
> RA Erkel C., Kemnitz D., Kube M., Ricke P., Chin K.-J., Dedysh S.,
> RA Reinhardt R., Conrad R., Liesack W.;
> RT "Retrieval of first genome data for rice cluster I methanogens by a
> RT combination of cultivation and molecular techniques.";
> RL FEMS Microbiol. Ecol. 53:187-204(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY683452; AAV85896.1; -; Genomic_DNA.
> DR SMR; Q4QXS4; 1-154.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 154 154
> SQ SEQUENCE 154 AA; 16794 MW; E06374541C3AD2FC CRC64;
> GGVGFTQYAT AAYTDDILDD FCYYGYDYIK GKYGIAKAKP TMDVVNDIGT EVTLYGIEQY
> EKYPTTLEDH FGGSQRATVL SAAAGVTTSL ATGNANAGLS AWYLSMYLHK EAWGRLGFFG
> YDLQDQCGAT NVFSCRSDEG AIDELRGPNY PNYA
> //
>
> ID Q49KC1_9ARCH PRELIMINARY; PRT; 176 AA.
> AC Q49KC1;
> DT 13-SEP-2005, integrated into UniProtKB/TrEMBL.
> DT 13-SEP-2005, sequence version 1.
> DT 30-MAY-2006, entry version 5.
> DE Methyl coenzyme M reductase (Fragment).
> GN Name=mcr;
> OS uncultured archaeon.
> OC Archaea; environmental samples.
> OX NCBI_TaxID=115547;
> RN [1]
> RP NUCLEOTIDE SEQUENCE.
> RX PubMed=16085853; DOI=10.1128/AEM.71.8.4592-4601.2005;
> RA Dhillon A., Lever M., Lloyd K.G., Albert D.B., Sogin M.L., Teske A.;
> RT "Methanogen diversity evidenced by molecular characterization of
> RT methyl coenzyme M reductase A (mcrA) genes in hydrothermal sediments
> RT of the Guaymas Basin.";
> RL Appl. Environ. Microbiol. 71:4592-4601(2005).
> CC -----------------------------------------------------------------------
> CC Copyrighted by the UniProt Consortium, see http://
> www.uniprot.org/terms
> CC Distributed under the Creative Commons Attribution-NoDerivs License
> CC -----------------------------------------------------------------------
> DR EMBL; AY837766; AAX46041.1; -; Genomic_DNA.
> DR SMR; Q49KC1; 1-176.
> DR InterPro; IPR008924; MCR_a/b_chain_C.
> DR InterPro; IPR009047; MCR_alpha_C.
> DR Pfam; PF02249; MCR_alpha; 1.
> FT NON_TER 1 1
> FT NON_TER 176 176
> SQ SEQUENCE 176 AA; 19653 MW; 736595D964EAC724 CRC64;
> YDQIWLGSYM SGGVGFTQYA TAAYTDNILD DFTYYGMDYL HDKYKIDWKN PNPKDKVKAT
> QEVVNDIAAE VNLYSMEQYE QFPTMMEDHF GGSQRAAVLG AACGLTTSIA TGNSNAGLNG
> WYLSMLMHKD GWSRLGFFGY DLQDQCGSAN SLSIRPDEGC IGEFRGPNYP NYAMNV
> //
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