[Bioperl-l] please help

[Sean Davis]

On 5/15/06 4:15 AM, "saurabh maheshwari" <s_maheshwari84 at rediffmail.com>
wrote:

>   
> Hello All
> I have sent a problem to the earlier also but my problem is still unsolve so i
> have modified the problem in another way please can any body give me code to
> make a graph between some items which are in a text file in the following
> formate:
> Example
> item1 interacts with item2 and i want to make graph by giving any item as
> input and asking all interactions of that item.
> 
> item 1      item 2
> A            B
> A            C
> C            B
> D            B
> D            E
> A            F
> G            A   

Not a bioperl answer, but in your case, I would suggest looking at using
cytoscape to do this.  Look here for details:

http://www.cytoscape.org/

Sean