[Bioperl-l] SeqUtils

[Brian Osborne]

Bernd,

That's easily done, changed both POD and code.

Brian O.


On 7/25/06 7:44 AM, "Bernd Web" <bernd.web at gmail.com> wrote:

> Hi,
> 
> With Bio::SeqUtils it may be nice to support 3 letter codes with
> capitals only, too.
> Now
> 
> my $string = Bio::SeqUtils->seq3in($seqobj, 'METGLYTER');
> 
> will give in $string->seq: XXX.
> 
> Possibly the capitals in MetGlyTer are used to find the amino acids codes?
> If not maybe it's easy to implement case-insensitive, or all-capitals
> for AA codes in SeqUtils?
> 
> In addition about the POD: maybe it's better not use use $string since
> Bio::SeqUtils->seq3in does not return a string but a Bio::PrimarySeq
> object.
> 
> Regards,
> Bernd
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