[Bioperl-l] Bio::Species/Bio::Taxonomy changes

Hilmar Lapp hlapp at gmx.net
Mon Jul 24 19:59:10 UTC 2006


On Jul 24, 2006, at 3:34 PM, Chris Fields wrote:

> Looks like the organelle sequence data uses the organism TaxID.

Then you might as well store it as annotation. Really the only thing  
that matters is that the flat file writers can get from an expected  
location.

In fact storing as annotation is better e.g. for Biosql since right  
now the taxonomy model is the NCBI model and so organelle will not be  
stored (and hence neither be round-tripped).

	-hilmar
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: Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
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