[Bioperl-l] SNP reference file download
vrramnar at student.cs.uwaterloo.ca
vrramnar at student.cs.uwaterloo.ca
Thu Jul 20 23:18:27 UTC 2006
Hello All,
I was wondering if anyone knew how to download an entire SNP reference file from
NCBI?? Or even downloading the sequence data for a particular SNP.
I know how to do this via Bio::DB::GenBank, Bio::DB::SwissP, etc.. when referring
to NM_##### but when I try to access rs###### files I am unsure of what Bio::DB
to point to, if there is one.
For example, if I had the accession number: rs4986950 How could I retrieve NCBI's
entire reference file for this SNP record OR just the SNP sequence relating to
this accession number.
Any help on this subject would greatly be appreciated,
Rohan
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