[Bioperl-l] bioperl 1.4 SearchIO doesn't work parsing Blast output
Hubert Prielinger
hubert.prielinger at gmx.at
Wed Feb 8 20:51:41 UTC 2006
Hi,
If I want to parse a Blast Output (Version 2.2.12) with Bio::SearchIO,
I get the following error message:
MSG: no data for midline Query 1 WWWKWRW 7
STACK Bio::SearchIO::blast::next_result
/usr/lib/perl5/site_perl/5.8.6/Bio/SearchIO/blast.pm:1151
STACK toplevel
/home/Hubert/installed/eclipse/workspace/Database_Search/Blast.pl:21
is that a bug......
If I want to parse Blast Output (version 2.2.13), I don't get anything.....
I'm using bioperl 1.4
before, I have installed bioperl 1.4, it worked fine parsing Blast
Output (version 2.2.12), but I don't remember which bioperl version I
had installed
thanks in advance
Hubert
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