[Bioperl-l] cut_seq in Bio::Tools::RestrictionEnzyme
Staffa, Nick (NIH/NIEHS) [C]
staffa at niehs.nih.gov
Thu Apr 6 14:25:09 UTC 2006
Please help me to understand the working of
cut_seq in
http://doc.bioperl.org/bioperl-live/Bio/Tools/RestrictionEnzyme.html#POD7
explicitly to extract the information contained in the return variable ---
some sort of reference to something.
Documentation says
Title : cut_seq
Usage : $re->cut_seq(<sequence object>);
Purpose : Conceptually cut or "digest" a DNA sequence with the given enzyme.
Example : $string = $re->cut_seq(<sequence object>);
Returns : List of strings containing the resulting fragments.
Argument : Reference to a Bio::PrimarySeq.pm-derived object.
Eventually I want the length of the fragments.
Thank you.
Nick Staffa
Telephone: 919-316-4569 (NIEHS: 6-4569)
Scientific Computing Support Group
NIEHS Information Technology Support Services Contract
(Science Task Monitor: Jack L. Field( field1 at niehs.nih.gov )
National Institute of Environmental Health Sciences
National Institutes of Health
Research Triangle Park, North Carolina
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