[Bioperl-l] possible bug printing GenBank feature qualfiers
Chris Fields
cjfields at uiuc.edu
Sat Apr 1 15:47:52 UTC 2006
Removed Scott's line from Bio::SeqIO::genbank in CVS (reverted back
to the previous version); it's much simpler that way and we avoid an
extra method call. Sorry about all the confusion here; I was worried
that the parsing issue I was seeing about the feature flag had
something to do with Scott's bug when they were completely unrelated.
Chris
On Apr 1, 2006, at 3:34 AM, Hilmar Lapp wrote:
>
> On Mar 31, 2006, at 8:26 PM, Chris Fields wrote:
>
>> Since the problem seems to be solved and both fixes (Scott's and
>> Heikki's) are redundant and essentially get the same results, one of
>> them should be rolled back.
>
> Please don't leave the line
>
> $value = $value->{"value"};
>
> Either remove it (because the problem needs to either be 'fixed' in
> all
> writers, or at the root), or if you want to leave this construct in,
> protect it with a conditional and use the method-based access as I
> sent
> an example before.
>
> -hilmar
> --
> ----------------------------------------------------------
> : Hilmar Lapp -:- San Diego, CA -:- hlapp at gmx dot net :
> ----------------------------------------------------------
>
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Christopher Fields
Postdoctoral Researcher
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign
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