[Bioperl-l] Proposal for AI methods in Bioperl

[Sean Davis]

On 10/12/05 12:09 PM, "Hilmar Lapp" <hlapp at gmx.net> wrote:

> You might want to look at the WEKA project for some design guidance and
> inspiration. The home page is at http://www.cs.waikato.ac.nz/ml/weka/
> and the API is documented at http://weka.sourceforge.net/doc/
> 
> Something that's equally well structured I think could be a generally
> useful contribution. I'd expect that to use a lot of compiled code
> though, number crunching just isn't what perl is best at.
> 
> Also, it may be worth checking out the dp package in Biojava for
> dynamic programming algorithms.

Moving slightly farther away from the original topic, but the bioconductor
project, and R more generally, offer many machine-learning tools and
packages.  

http://www.bioconductor.org
http://www.r-project.org

Sean