[Bioperl-l] Program

[Brian Osborne]

Zhang,

All of NCBI's applications are available as source, just as all the data at
NCBI is freely available to all and easily accessed. See, for example:

http://www.ncbi.nlm.nih.gov/IEB/ToolBox/index.cgi


Brian O.


> Seems that NCBI Blast is not an oss project, anyway, but I still wonder if
> there're some hints of its source code.
> 
> 2005/11/23, Barry Moore <bmoore at genetics.utah.edu>:
>> Manish,
>> 
>> That comes from NCBI which is separate from the Bioperl project.
>> 
>> http://www.ncbi.nlm.nih.gov/BLAST/download.shtml
>> 
>> Barry
>> 
>>>> -----Original Message-----
>>>> From: bioperl-l-bounces at portal.open-bio.org [mailto:bioperl-l-
>>>> bounces at portal.open-bio.org] On Behalf Of Manish Kumar
>>>> Sent: Tuesday, November 22, 2005 4:48 AM
>>>> To: bioperl-l at bioperl.org
>>>> Subject: [Bioperl-l] Program
>>>> 
>>>> Hello,
>>>>            I am Manish Kumar n I m M.Sc
>>>> (Bioinfomatics) student n i need the perl program for BLAST. I
>>>> mean what is the program for BLAST that it gives this type of
>>>> results.
>>>> 
>>>> 
>>>> For example:-
>>>> Score = 40.1 bits (20),  Expect = 0.16 Identities = 23/24 (95%),
>>>> Gaps = 0/24 (0%) Strand=Plus/Minus
>>>> 
>>>> Query  1     ATGTGTACGTGCGTGGTTACGTGC  24
>>>>              ||||||||||| |||||||||||| Sbjct  8466
>>>> ATGTGTACGTGTGTGGTTACGTGC  8443
>>>> 
>>>> The above is an example of the BLAST output. Now i need the
>>>> program for this output.
>>>> thanking you
>>>> Best Regards
>>>> Manish
>>>> 
>>>> 
>>>> 
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>> 
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> 
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