[Bioperl-l] mystery

Tamas Horvath hotafin at gmail.com
Wed Jun 22 13:03:24 EDT 2005


well, I have some other loops in my script wich are all work fine.
Maybe this is some sort of mysterious bug of the IDE's debugger...
thank's anyway.

PS.: Afterwards I've tested it "outside" the IDE, and it worked fine
for me to...

On 6/22/05, Andreas Boehm <andreas.boehm at virchow.uni-wuerzburg.de> wrote:
> Hi,
> 
> it works fine with my perl version:
> perl5 (revision 5.0 version 8 subversion 0)
> 
> Maybe you have a buggy compilation, that has a problem with the /g in
> your while-loop?
> 
> regards,
> Andreas Boehm
> 
> Tamas Horvath wrote:
> > while ($pdb_data =~ /(REMARK 999.*)/g) {
> >      die "die2";
> >     }
> > die"die1" if $pdb_data =~ /(REMARK 999.*)/;
> >
> > the following code terminates with "die1". Does anyone know why?
> > the $pdb_data is a string of a pdb entry (1PHK)
> >
> > it has the following REMARK 999 lines:
> >
> > REMARK 999
> > REMARK 999 SEQUENCE
> > REMARK 999 1PHK       SWS     P00518       1 -    14 NOT IN ATOMS LIST
> > REMARK 999 1PHK       SWS     P00518     292 -   386 NOT IN ATOMS LIST
> >
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at portal.open-bio.org
> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
> >
> >
> 
>



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