[Bioperl-l] Entrez Gene parser questions
Hilmar Lapp
hlapp at gmx.net
Thu Jun 9 20:55:17 EDT 2005
Guys, don't over-inflate this. I said no offense intended, Stefan said
none taken, so why don't we discontinue this thread and you guys just
fix it at some point. OK?
-hilmar
On Jun 9, 2005, at 9:55 PM, Mingyi Liu wrote:
> Brian Osborne wrote:
>
>> Bioperl,
>>
>>
>>> Stefan and Mingyi should fix whatever is needed to silence those
>>> warnings. (No offense please)
>>>
>>
>> Yes, I should support Hilmar here. When we are working through the
>> full test
>> suite before a formal release our goal has always been to eliminate
>> all
>> errors *and* warnings, not just errors.
>>
>> Brian O.
>>
>>
> Hi, Brian & Hilmar,
>
> I think both of you misunderstood (or missed part of) the previous
> email exchanges between Stefan and me and jumped to conclusion too
> soon. In my previous email, it began with "Stefan's right in
> suggesting you turn off -w, which would make your script work.", which
> likely led to your worries. But that's totally unnecessary - this is
> just a temporary solution suggested to end user. It is not a
> suggestion that we will not fix it or end user should change their
> programming habit.
>
> In fact, if you please read on, in the latter part of the same
> message, I suggested a fix that would fix the problem end user saw,
> which Stefan immediately responded that he'd incorporate it. I'm sure
> Stefan would get rid of those annoying "use of unitialized value"
> warnings too. That's the long term solution we proposed and (to be)
> implemented to fix the issue raised by end user. So truly there's no
> reason to worry or take sides here. We don't really have a difference
> in our user support approaches, despite our apparent different
> attitudes towards the importance of '-w' switch. :)
>
> Mingyi
>
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>
--
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Hilmar Lapp email: lapp at gnf.org
GNF, San Diego, Ca. 92121 phone: +1-858-812-1757
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