[Bioperl-l] Accessing database settings

[Wacki]

When I run: bp_load_gff.pl -c -d volvox volvox_all.fa volvox_all.gff


I get:
------------------------------------------------------------------------------------------------------------------------------------------------

DBI connect('volvox','',...) failed: Access denied for user ''@'localhost' 
to database 'volvox' at 
/usr/lib/perl5/site_perl/5.8.5/Bio/DB/GFF/Adaptor/dbi/caching_handle.pm line 
139

------------- EXCEPTION -------------
MSG: Can't connect to database: Access denied for user ''@'localhost' to 
database 'volvox'
STACK Bio::DB::GFF::Adaptor::dbi::caching_handle::new 
/usr/lib/perl5/site_perl/5.8.5/Bio/DB/GFF/Adaptor/dbi/caching_handle.pm:89
STACK Bio::DB::GFF::Adaptor::dbi::new 
/usr/lib/perl5/site_perl/5.8.5/Bio/DB/GFF/Adaptor/dbi.pm:93
STACK Bio::DB::GFF::Adaptor::dbi::mysql::new 
/usr/lib/perl5/site_perl/5.8.5/Bio/DB/GFF/Adaptor/dbi/mysql.pm:270
STACK Bio::DB::GFF::new /usr/lib/perl5/site_perl/5.8.5/Bio/DB/GFF.pm:599
STACK toplevel /usr/bin/bp_load_gff.pl:103

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On 7/25/05, Scott Cain <cain at cshl.edu> wrote:
> 
> Hello,
> 
> I am guessing you are writing about accessing a GFF database, since you
> are also posting questions to the gbrowse mailing list. Also, from your
> posts there, I'm guessing that you have figured it out. If I am not
> guessing correctly, please re-ask the question and make it a little more
> clear what you mean.
> 
> Scott
> 
> 
> On Sat, 2005-07-23 at 22:53 -0500, Wacki wrote:
> > I installed bioperl but didn't use the right password/username combo. 
> How do
> > I change it? Thanks for the help.
> >
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at portal.open-bio.org
> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
> --
> ------------------------------------------------------------------------
> Scott Cain, Ph. D. cain at cshl.edu
> GMOD Coordinator (http://www.gmod.org/) 216-392-3087
> Cold Spring Harbor Laboratory
> 
>