[Bioperl-l] Bio::SearchIO::blast parsing problem with long hit
scores
Scott Markel
smarkel at scitegic.com
Wed Jan 26 13:50:35 EST 2005
I have a blastn result with a hit score that's in exponential
notation. Bio::SearchIO::blast truncates "2.741e+004" to "004".
I get the same result in 1.4 and 1.5.
Sequences producing significant alignments: (bits) Value
emb|AJ010957.1|HAAJ10957 Hippopotamus amphibius complete mitocho... 2.741e+004 0.0
gb|U31048.1|PRU31048 Pronolagus rupestris, Donkerpoort, South Af... 305 1e-080
Scott
--
Scott Markel, Ph.D.
Principal Bioinformatics Architect email: smarkel at scitegic.com
SciTegic Inc. mobile: +1 858 205 3653
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