[Bioperl-l] gd-png: fatal libpng error: Image width or height is
zero in IHDR
Danielucg Sousa
danielucgbioinfo at yahoo.com.br
Fri Jan 14 15:25:58 EST 2005
HI,
I have done my code with image_and_map of
Bio::Graphics::Pane Classe. So, out this message:
> gd-png: fatal libpng error: Image width or height
is zero in IHDR
> gd-png error: setjmp returns error condition
My code until this erro is:
#!/usr/bin/perl -wT
use strict;
use Bio::Graphics;
use Bio::SeqIO;
use Bio::SeqFeature::Generic;
#use CGI ':standard';
use CGI::Pretty;
my $file = '/var/www/cgi-bin/AL391145.gb';
my $io = Bio::SeqIO->new(-file=>$file);
my $seq = $io->next_seq;
#my $wholeseq =
Bio::SeqFeature::Generic->new(-start=>1,-end=>$seq->length);
my @features = $seq->all_SeqFeatures;
my $q = new CGI;
# sort features by their primary tags
my %sorted_features;
for my $f (@features) {
my $tag = $f->primary_tag;
push @{$sorted_features{$tag}},$f;
}
print $q->header('text/html');
print $q->start_html('A Vector Rendering ');
my $panel =
Bio::Graphics::Panel->new(-length=>$seq->length,
-width => 1000, -pad_left => 10,
-pad_right => 10, -key_color =>
'white', -key_spacing => 15, -key_style
=> 'bottom', -spacing => -0.25,
-box_subparts => 'true' );
my ($url,$map,$mapname) = $panel->image_and_map(-root
=> '/home/bioinfo/cgi-bin',-url => '/tmpimages', );
----
I don't know what I have to do. Please somebody help
me.
By,
Daniel
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