[Bioperl-l] Strange result

[Hilmar Lapp]

Right. Either downgrade to 1.4 or upgrade to a CVS snapshot of the main 
trunk.

	-hilmar

On Aug 24, 2005, at 5:55 AM, Ewan Birney wrote:

>
>
> Barry Moore wrote:
>> Show us the code that produced this result.
>> Barry
>> thechans at citiz.net wrote:
>>> Hello,
>>> I am new to Bioperl. I want to just copy some sequences out of an 
>>> existing genbank file(multiple seq included).
>>> The selected sequences is still gb format and put to a new file.
>>> I received no warning and it worked well but the new file showed 
>>> something strange.
>>> e.g,
>>>                     
>>> /country="Bio::Annotation::SimpleValue=HASH(0x1bdc7a4)"
>>>                     
>>> /db_xref="Bio::Annotation::SimpleValue=HASH(0x1bdc9cc)"
>>>                     
>>> /mol_type="Bio::Annotation::SimpleValue=HASH(0x1bdca68)"
>>>                     
>>> /isolate="Bio::Annotation::SimpleValue=HASH(0x1bdc8ac)"
>>>                     
>>> /organism="Bio::Annotation::SimpleValue=HASH(0x1bdc954)"
>>> why it happened?
>>>
>
> And the version. This is a 1.5x bug due to the skew that
> happened in the ontology/embl/genbank thingy. I think if you
> went back to an earlier version of bioperl you'd be fine.
>
>
>
>>>
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>>> Bioperl-l at portal.open-bio.org
>>> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>>>
> _______________________________________________
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>
>
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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