[Bioperl-l] Shuffling sequences

Hilmar Lapp hlapp at gmx.net
Wed May 26 00:30:19 EDT 2004


Isn't there a tool in EMBOSS that exactly that and does it pretty fast?

On Tuesday, May 25, 2004, at 12:16  PM, Jason Stajich wrote:

> my $i = 1;
> for my $s ( @randomseqs ) {
>   my $newseq = new Bio::PrimarySeq(-display_id => "rand.$i",
> 	                           -seq        => $s);
>   $out->write_seq($s);

$i++;

	-hilmar

> }
>
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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