[Bioperl-l] Accessing SearchIO BLAST parser available_parameters/statistics

[Jason Stajich]

As it shows you in the SearchIO SYNOPSIS

 my $kappa = $result->get_statistic('kappa');
 my @statnames = $result->available_statistics;


So to print them all
for my $stat ( $result->available_statistics ) {
  printf "%s %s\n", $stat, $result->get_statistic($stat);
}

Same goes for the savailable_parameters/get_parameter methods.

-jason

On Fri, 21 May 2004, Bjorn F.C. Kafsack wrote:

> I'm trying to get at the values stored in
>
> $result->available_parameters or $result->available_statistics
>
> which must be some form of hash but i can't figure out how.
>
> in scalar context i get the number of keys
> in list context i get the keys
> i tried
>
> %stats = %{$result->available_statistics};
> %stats{kappa};
>
> but the assignment doesn't work.
>
> $result->available_statistics->kappa;
>
> that doesn't work either.
>
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu