[Bioperl-l] new modules

[Jason Stajich]

I added Bio::Tools::Run::Alignment::MAFFT ( a suite of multiple sequence
alignment programs) to the bioperl-run repository plus some new tests for
the tree method addition to Clustalw.

Also added Bio::Tools::tRNAscanSE parser in bioperl-live which will
produce tRNA gene and exon features suitable for loading into Gbrowse.

-jason

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu