[Bioperl-l] hmmpfam report indexing

[Jason Stajich]

Bio::Index::Blast  is an example of how to do this for BLAST report files,

it would be simple to do the same  searching for the HMMPFAM 1st line
insead of  /^T?BLAST[PNX]/ in the _index_file method.

-jason


On Fri, 30 Apr 2004 stephan.rosecker at ish.de wrote:

> Hi,
>
> has anybody written a script to index hmmpfam reports.
> I'm not a perl guru, so this woud be very usefull for me.
>
> Regards,
> stephan
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu