[Bioperl-l] "strand" line in bl2seq output

Dominique Vlieghe dominique.vlieghe at dmbr.ugent.be
Mon Mar 29 07:20:55 EST 2004


Hello all,

I have a question regarding the parsing of bl2seq output (using 
Bio::Tools::BPbl2seq). In the bl2seq output there is a line for strand 
orientation (e.g. "Strand = Plus / Plus"). I looked at the modules that 
parse this file, but I don't see where those lines are processed. Is 
this correct? If it is, what's the alternative for getting this valuable 
information?

Regards

Dominique

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Dominique Vlieghe, Ph.D.,
Bioinformatics Core,
Department for Molecular Biomedical Research (DMBR)
VIB - Ghent University
'Fiers-Schell-Van Montagu' building
Technologiepark 927
B-9052 Ghent (Zwijnaarde), Belgium

Tel : +32-(0)9-33-13.693
Fax : +32-(0)9-33-13.609
email:dominique.vlieghe at dmbr.ugent.be
www:http://www.dmbr.ugent.be/
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