[Bioperl-l] alignio

Jason Stajich jason at cgt.duhs.duke.edu
Sun Mar 21 21:26:57 EST 2004

use IO::String to make a filehandle and pass the fh in.

See the FAQ - analagous information for how to do this for SeqIO.

On Sun, 21 Mar 2004, Michael Cipriano wrote:

> If I have a string that is the text that is inside a nexus file, can I
> get that to an AlignIO object without creating a temp file?
> Michael Cipriano (mcipriano at mbl.edu)
> Research Assistant I, Global Infectious Diseases
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at portal.open-bio.org
> http://portal.open-bio.org/mailman/listinfo/bioperl-l

Jason Stajich
Duke University
jason at cgt.mc.duke.edu

More information about the Bioperl-l mailing list