[Bioperl-l] How to get the PSSm from blastpgp or PSI-Blast run

[Aaron J. Mackey]

-Q checkpoint.txt

-Aaron

On Mar 15, 2004, at 6:29 PM, Huzefa Rangwala wrote:

>
> Hello
>
> Is there any command by which I can get the PSSM(Position Specific  
> Scoring
> Matrices) in ASCII format. Note blastpgp with -C option creates the  
> matrix
> in binary.
>
> Regards
> Huzefa
>
> ----------------------------------------------------------------------- 
> ---
> Huzefa Rangwala		   	   Email:rangwala at cs.umn.edu
> Research Assistant,		   Tel: 612-625-3796
> Dept. of Computer Sci & Engg.	   URL: http://www.cs.umn.edu/~rangwala
> University of Minnesota
> ----------------------------------------------------------------------- 
> ---
>
>
>
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