[Bioperl-l] Writing a Bio::Assembly::Contig using Bio::AlignIO

[Lewis, Christopher]

Just missing characters at the beginning and end of a sequence.

cheers,
Chris 

> -----Original Message-----
> From: Aaron J Mackey [mailto:amackey at pcbi.upenn.edu]
> Sent: Monday, July 05, 2004 4:40 PM
> To: Lewis, Christopher
> Cc: bioperl-l at portal.open-bio.org
> Subject: Re: [Bioperl-l] Writing a Bio::Assembly::Contig using
> Bio::AlignIO
> 
> 
> Re: pad/unpad; does this add gaps or missing chars?  If missing, then
I
> can't see how this could be a bad thing, and I'd vote in favor of it
(in
> AlignI) ...
> 
> -Aaron