[Bioperl-l] Problems parsing swiss-prot files

[Jason Stajich]

Is there more than one RP line per reference?  The data structures and
parsers currently assume there is only one.
can you send an acc so we can add it to the tests?

-jason
On Thu, 1 Jul 2004, Jessica Dantzer wrote:

> I'm working on parsing swiss-prot files for use in another database, and
> I've managed to work out where all the information I need is stored for
> the most part.  The only problems I'm encountering are with the reference
> parsing-- Some of the files have multiple "RP" lines, and I only seem to
> be able to get one.  The code seems to indicate that this is how the files
> are parsed.  Is there any other way to access the second line?
>
> Thanks,
> Jessica
>
>
>
>
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu