[Bioperl-l] <AUTHOR_LIST> missing

[matthieu CONTE]

Hello,
I have a new problem to load the whole rice genome form Tigr to my biosql db
I have download the parser $tigrxml.dtd.......
Thanks.


perl load_seqdatabase.pl --host biopipe --dbname biopipe --namespace biopipe 
--format tigr  /home/conte/pipeline_orthologues/data/orysa_tigr.txt
Loading /home/conte/pipeline_orthologues/data/orysa_tigr.txt ...

------------- EXCEPTION  -------------
MSG: [19]Required <AUTHOR_LIST> missing
STACK Bio::SeqIO::tigr::throw 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO/tigr.pm:1338
STACK Bio::SeqIO::tigr::_process_header 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO/tigr.pm:700
STACK Bio::SeqIO::tigr::_process_assembly 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO/tigr.pm:535
STACK Bio::SeqIO::tigr::_process_tigr 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO/tigr.pm:453
STACK Bio::SeqIO::tigr::_process 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO/tigr.pm:420
STACK Bio::SeqIO::tigr::_initialize 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO/tigr.pm:90
STACK Bio::SeqIO::new 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO.pm:358
STACK Bio::SeqIO::new 
/usr/local/ActivePerl-5.8/lib/site_perl/5.8.0/Bio/SeqIO.pm:378
STACK toplevel load_seqdatabase.pl:436





Matthieu CONTE

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