[Bioperl-l] get sequence failure

[william ritchie]

Hi,

I m trying to retrieve a sequence with the following
code:

use Bio::SearchIO;
use Bio::Perl;
use Bio::SeqIO;

my $seq_object = get_sequence("nr","NT_039208.2");

and I m getting this error:

MSG: id does not exist
STACK Bio::DB::WebDBSeqI::get_Seq_by_id
/usr/lib/perl5/site_perl/5.8.0/Bio/DB/WebDBSeqI.pm:155
STACK Bio::Perl::get_sequence
/usr/lib/perl5/site_perl/5.8.0/Bio/Perl.pm:513
STACK toplevel getseq.pl:9

this ID does exist, using the ncbi interface I can
retrieve it!
Help!!!!Please!!



	

	
		
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