[Bioperl-l] problem installing bioperl on cygwin

[Brian Osborne]

Yoram,

One thing to try is the rebaseall program that comes with Cygwin.

Brian O.

-----Original Message-----
From: bioperl-l-bounces at portal.open-bio.org
[mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of Yoram Burak
Sent: Saturday, December 18, 2004 5:32 PM
To: bioperl-l at portal.open-bio.org
Subject: [Bioperl-l] problem installing bioperl on cygwin



I am trying to isntall bioperl on cygwin.

When I run perl -MCPAN -e "install Bundle::BioPerl" it
works for a while but then exits with an error (see
below). Help will be highly appreciated.

Yoram

CPAN: Digest::MD5 loaded OK
LWP not available
Fetching with Net::FTP:ftp:
   //ftp.perl.org/pub/CPAN/authors/id/C/CR/CRAFFI/CHECKSUMS
Checksum for
/home/yorambu/.cpan/sources/authors/id/C/CR/CRAFFI/Bundle-BioPerl-2.1.5.tar.
gz
ok
Scanning cache /home/yorambu/.cpan/build for sizes
C:\cygwin\bin\perl.exe (3512): *** couldn't release memory
0xDE4000(1032192) for
'C:\cygwin\lib\perl5\5.8.5\cygwin-thread-multi-64int\auto\Cwd\Cwd.dll'
alignment, Win32 error 487

      4 [main] perl 1008 sync_with_child: child
3512(0x628) died before initialization with status code
0x1
  38547 [main] perl 1008 sync_with_child: *** child state
child loading dlls
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