[Bioperl-l] Parsing TGICL-CAP3 ACE result files

[Javier Forment Millet]

Hi,...

I have to parse CAP3 ACE result files obtained with the TGICL pipeline (TIGR
Gene Indices clustering tools). I know about the bioperl-1.4::Bio::Assembly
module for working with contig assemblies, but it seems to be Phrap-orientated.
Has anybody parsed CAP3 ACE result files with this module or a modification of
it? Is there another module available for parsing these files?

Thanks a lot,

Javier.

-- 
Javier Forment Millet
Instituto de Biologia Molecular y Celular de Plantas (IBMCP)
UPV-CSIC
Avenida de los Naranjos, s/n
46022 Valencia (SPAIN)
jforment at ibmcp.upv.es
Tlf.:+34-96-3877885