[Bioperl-l] Re: Given a protein sequence (and its Genbank accession number), how to get the accession number of corresponding mRNA sequence?

[Wuming Gong]

Hi list, 

In fact, I wanna get the coding sequences of the given proteins. Can I
perform the job by tblastn the proteins to refseq databases followed
by extracting the CDS sequences according to the start and end locus
of CDS in the SeqFeature section ? Thanks.

Wuming


On Fri, 3 Dec 2004 18:48:23 +0800, Wuming Gong <gongwuming at gmail.com> wrote:
> Hi list,
> 
> Could you please give me some clues on how to map a protein sequences
> which accession number is already known to a mRNA sequences in
> GenBank?
> 
> Thanks!
> 
> Wuming
>