[Bioperl-l] setting BLAST query name

Rachel Richard rachel at nmcfarl.org
Fri Apr 30 16:44:44 EDT 2004


Hi,
I have a simple problem but i can't figure out the solution. Perhaps 
because it is Friday afternoon. :-)
I'm doing a standalone BLAST query, and I want to set the query name. 
On the results page there is a line where it says Query=, and I want it 
to say Query=MyQueryName. I can't seem to figure where to pass the 
query name value in.

     my $factory = Bio::Tools::Run::StandAloneBlast->new(@params);
   my $blast_report = $factory->blastall($seq);
   $blast_report->to_html(-OUT => \@array);

(Here's what the results page looks like)
Program: BLASTN 2.2.3 [May-13-2002]
Query=
       (2280 letters)
...blast results blah blah blah...

Thanks,
Rachel

Rachel Richard
rachel at nmcfarl.org
(505) 570-0670
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