[Bioperl-l] Help
Sameet Mehta
mehta_sameet at vsnl.net
Tue Apr 27 12:54:53 EDT 2004
I need to download sequences randomly from any genome database, and also
download its annotation. I belive downloading the GenBank format will do
that for me most of the times. I had the following strategy in mind
Select a chromosome randomly
for each chromosome
select a contig randomly
in each contig select a sequence (either begining or the end and calculate
the remaining coordinate
download the sequence
But i am really not a good coder!! I have written a longish program for for
the first 2 loops, but i am still trying to figure out a way to code for the
3rd nested loops
all the help is highly solicitated
regards
sameet
--
______________________________________
Sameet Mehta,
Flat No. 1, Madhav Baug Apartments,
Oppossite Baner Datta Mandir,
Baner,
Pune 411045
Maharashtra
INDIA
Tel: #91 20 27293382
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