[Bioperl-l] population genetics

[Paulo Almeida]

    I don't know about LD (linkage disequilibrium?) and EM models on 
bioperl, but there are probably implementations for various applications 
of it on R statistics software (I know there is for QTL analysis). I 
recently came across this module to control the R interpreter from Perl:

     http://search.cpan.org/~gmpassos/Statistics-R-0.02/lib/Statistics/R.pm
   
    Seeing that R is also Open Source, it might be interesting to use it 
with BioPerl.

    -Paulo Almeida

Pedro.X.Gomez-Fabre at gsk.com wrote:

>Hi all,
>
>I would like to go for an LD viewer and infer haplotypes based on EM 
>model. I was wondering is some on the list is doing something like that.
>
>Cheers
>Pedro.
>