[Bioperl-l] bio::graphics problem
mariano latorre
malatorr at genoma.ciencias.uchile.cl
Tue Apr 20 10:32:47 EDT 2004
I installed bioperl because I'm interested on using bio::graphics.
The first time I try to install bioperl it says I have problems
installing bio::graphics because I probably don't have GD or
Text::Shellwords. It was not specific.
Later I try installing GD:
perl-GD-1.41-0.rh90.dag.i386.rpm
And then Text-Shellwords-1.06
Then I tried again installing bioperl 1.4 using perl Make.PL make make
install etc
It said bio:graphics installed ok!
But I still having problems...When I try the first example
(****render_blast1.pl on
http://bioperl.org/HOWTOs/html/Graphics-HOWTO.html**) with "perl -d" on
a blast report
I get this error:
/[malatorr at myserver]$ cat blastX_report.txt | ./test.pl
Loading DB routines from perl5db.pl version 1.19
Editor support available.
Enter h or `h h' for help, or `man perldebug' for more help.
main::(./test.pl:8): my $panel = Bio::Graphics::Panel->new(-length
=> 1000,-width => 800);
/What could be wrong?
Thank you.
Mariano Latorre
Universidad de Chile
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