[Bioperl-l] Compilation error

[Brian Osborne]

Sivakumar,

Have you installed the bioperl package as well as the bioperl-run package?

Brian O.


-----Original Message-----
From: bioperl-l-bounces at portal.open-bio.org
[mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of Sivakumar.K.C
Sent: Tuesday, April 20, 2004 7:10 AM
To: bioperl-l at bioperl.org
Subject: [Bioperl-l] Compilation error

Dear Sir,

i have downloaded current_run_stable.tar.gz from the
site and followed the instructions in the file README.
After that i tried to run a programme Clustalw.pl from
bioperl-run-1.4/examples/pise show some error
like...this..

Can't locate Bio/Root/Root.pm in @INC (@INC contains:
/usr/lib/perl5/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/5.8.0
/usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.0
/usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.0
/usr/lib/perl5/vendor_perl .) at
/usr/lib/perl5/site_perl/5.8.0/Bio/Tools/Run/AnalysisFactory/Pise.pm
line 148.
BEGIN failed--compilation aborted at
/usr/lib/perl5/site_perl/5.8.0/Bio/Tools/Run/AnalysisFactory/Pise.pm
line 148.
Compilation failed in require at clustalw.pl line 2.
BEGIN failed--compilation aborted at clustalw.pl line
2.


Sir, please help me in rectifying the problem...

hoping for a early reply..

with regards
Sivakumar


=====
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Sivakumar K.C
Bioinformatics Consultant
Center for Bioinformatics and Computational biology
Soundarya Buildings,Thiruvananthapuram,
Kerala - 695001
~~~~~~~~~~~~~~~

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