[Bioperl-l] AlignIO: Sequence length appended to name in output

Heikki Lehvaslaiho heikki at nildram.co.uk
Thu Apr 15 12:23:06 EDT 2004


Iain,

See the pod documentation for reasons for that. You can this feature on oand 
off using methods  set_displayname_flat() and set_displayname_normal().

	-Heikki


On Thursday 15 Apr 2004 13:44, Iain Wallace wrote:
> Hi
>
> I am using the AlignIO module to manipulate alignments. I noticed that
> every time I write out an alignment the sequence length gets appended to
> the name of the sequence
> e.g. >1srya becomes >1srya/1-311
>
> Does anyone know how I can turn this feature off?
>
> Thanks for your help again
>
> Iain
>
>
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