[Bioperl-l] deleting string fragments?
Gyoergy Abrusan
abrusan at mpil-ploen.mpg.de
Thu Apr 1 04:33:24 EST 2004
Dear All,
I would like to ask whether there is a command that deletes a certain
fragment of a sring.
what I mean is:
eg. I have stings like
adfdfgfgg-dfgdfmgfgfgfg
I would like to remove -dfg and print out only
adfdfgfggdfmgfgfgfg
Is there a commad (something similar to chop)that removes an arbitrary
substring from a string (the place of the target sequences is alvays
different)?
eg.:
open (OUT, ">RESULTS.txt")
while(<>)
{
if ($_=~ /-dfg/g)
{cut out -dfg ???
print OUT "$_";}
else
{print OUT "$_";}
}
close OUT;
I would greatly appreciate any help.
Thanking you in advance.
Best,
Gyorgy Abrusan
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