[Bioperl-l] palindrome

Jason Stajich jason at cgt.duhs.duke.edu
Tue Sep 30 22:29:54 EDT 2003


I needed it so I wrote it - Added a parser for EMBOSS's 'palindrome' program as
Bio::Tools::EMBOSS::Palindrome

Others writing EMBOSS parsers should throw them in there as well I guess.
The water/needle/matcher alignment parsing is handled by
Bio::AlignIO::emboss currently - might add a pointer or a fake class which
delegates to this for folks who are expecting to find parsers for that
data in there as well.

-jason

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu


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