[Bioperl-l] Bio::Seq documentation?

[Marc Logghe]

> -----Original Message-----
> From: Wes Barris [mailto:wes.barris at csiro.au]
> Sent: Wednesday, September 24, 2003 6:46 AM
> To: Bioperl Mailing List
> Subject: [Bioperl-l] Bio::Seq documentation?
> 
> 
> Hi,
> 
> According to the bioperl documentation the Bio::SeqIO genbank method
> "next_seq" returns a "Bio::Seq" object.  Where is the documentation
> for a "Bio::Seq" object?  In the documentation on the bioperl 
> web site,
> if you click on "bioperl-1.2.3::Bio::Seq" I see the following list:

You have to click on "bioperl-1.2.3::Bio". Consider it as a directory. In the Bio directory you should find the Seq.pm module.
Actually, Bio::SeqIO::genbank returns a Bio::Seq::RichSeq object (which is-a Bio::Seq object).
HTH,
Marc