[Bioperl-l] Question about genbank.pm/SeqIO support for info in SEGMENT Genbank line

Susan Cassidy scassidy at accelrys.com
Wed Sep 10 18:34:10 EDT 2003


If a Genbank entry has a SEGMENT line, like the following (partial) entry:

        LOCUS       AARPOB2                  871 bp    DNA     linear BCT 
03-FEB-2000
        DEFINITION  Abiotrophia adiacens RNA polymerase beta subunit 
(rpoB) gene,
                partial cds.
        ACCESSION   AF194508
        VERSION     AF194508.1  GI:6449110
        KEYWORDS    .
        SEGMENT     2 of 2
        SOURCE      Granulicatella adiacens

I do not see anywhere that that information is saved/returned via any 
SeqIO method.  I looked at genbank.pm, and did not see any reference to 
that line at all.

Am I missing something?

Thanks,
Susan Cassidy


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