[Bioperl-l] Bio::Biblio

Brian Osborne brian_osborne at cognia.com
Tue Oct 7 08:19:13 EDT 2003


Charles,

Take a look at examples/biblio/biblio_examples.pl, there are some
one-liner's there that you might find useful.

Brian O.

-----Original Message-----
From: bioperl-l-bounces at portal.open-bio.org
[mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of Charles Plessy
Sent: Monday, October 06, 2003 10:05 AM
To: bioperl-l at bioperl.org
Subject: [Bioperl-l] Bio::Biblio

Hi,

        My goal is to write a quick-and-dirty medline2docbook fliter
for immediate use, using bioperl since it has already a library able
to query medline.

        However, I don't know how to quickly extract basic fields,
like author or journal, to use them in this kind of output system:

print << DOCBOOK
(...)
<biblioset>
   <authorgroup>
    <author>
     <surname>$object->Author_surname</surname>
     <firstname>$object->Author_firstname</firstname>
    </author>
(...)
DOCBOOK

Can anybody point me to the correct object and its construction method?

--
Charles
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