[Bioperl-l] passing multiple databases to blastall

Andrew Nunberg anunberg at oriongenomics.com
Fri May 30 17:00:45 EDT 2003


Hi,
in blast you can pass multiple databases to blastall (-d "db1 db2 
db3"), the quotes are required.

In bioperl-1.2 if i pass the option to the blast factory, 
$factory->d('"db1 db2"');

the result is not the expected behavior.  The first db is seen but not 
the second.

any ideas?

Andy Nunberg
Orion Genomics



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