[Bioperl-l] Why is '+' a delimiter in $OBDA_SEARCH_PATH?
Hilmar Lapp
hlapp at gnf.org
Thu May 22 15:41:23 EDT 2003
I'm for semicolon. Isn't that more url-ish even (wasn't semicolon going
to replace the ampersand)? -hilmar
> -----Original Message-----
> From: Brian Osborne [mailto:brian_osborne at cognia.com]
> Sent: Thursday, May 22, 2003 10:50 AM
> To: lstein at cshl.org; Andreas Kahari
> Cc: bioperl-l at bioperl.org
> Subject: RE: [Bioperl-l] Why is '+' a delimiter in $OBDA_SEARCH_PATH?
>
>
> Lincoln,
>
> I will wait a few days and change it to semi-colon if no one
> objects. My apologies to those who will have to change their
> OBDA_SEARCH_PATHs.
>
> Brian O.
>
> -----Original Message-----
> From: bioperl-l-bounces at portal.open-bio.org
> [mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of
> Lincoln Stein
> Sent: Thursday, May 22, 2003 12:49 PM
> To: Brian Osborne; Andreas Kahari
> Cc: bioperl-l at bioperl.org
> Subject: Re: [Bioperl-l] Why is '+' a delimiter in $OBDA_SEARCH_PATH?
>
> What was wrong with using ";" then? It's unlikely to be
> found in Unix path names because of its meaning to the shell.
>
> Lincoln
>
> On Thursday 22 May 2003 10:13 am, Brian Osborne wrote:
> > Andreas,
> >
> > >The standard search path delimiter is the ':' (see you
> $PATH variable
> > >for example).
> >
> > Of course you're right. It's the Windows PATH that's
> delimited by ';'.
> >
> > Brian O.
> >
> >
> > -----Original Message-----
> > From: Andreas Kahari [mailto:ak at ebi.ac.uk]
> > Sent: Thursday, May 22, 2003 10:03 AM
> > To: Brian Osborne
> > Cc: bioperl-l at bioperl.org
> > Subject: Re: [Bioperl-l] Why is '+' a delimiter in
> $OBDA_SEARCH_PATH?
> >
> > On Thu, May 22, 2003 at 07:48:47AM -0400, Brian Osborne wrote:
> > > Bioperl-l,
> > > The character '+' is being used a delimiter in this
> variable instead
> > > of
> >
> > the
> >
> > > standard Unix ';'. If I'm not mistaken one can use '+' in a
> > > directory or file name, whereas ';' seems not to be allowed. In
> > > fact, isn't
> >
> > "lost+found"
> >
> > > a system directory in some Unixes? Anyway, I will change
> this unless
> >
> > someone
> >
> > > can convince me not to.
> > > Brian O.
> >
> > The ';' may be part of a directory or file name without any problem
> > (just quote it for the shell). The forward slash ('/'),
> however, is
> > not allowed on Unix-type systems (Mac OS X might have additional
> > restrictions with ':'?).
> >
> > The plus sign is very uncommon in file names, and the "lost+found"
> > directory (where 'fsck' stores files and directories which doesn't
> > have an associated name after a system or disk crash) is about the
> > only place I've ever seen it... Having said that I haven't
> seen ';'
> > in a name *anywhere*, but it's allowed.
> >
> > mkdir ';'
> > ls -ldF ';'
> > drwxr-x--x 2 ak ensembl 4096 May 22 14:00 ;/
> >
> > The standard search path delimiter is the ':' (see you
> $PATH variable
> > for example).
> >
> > Andreas
>
> --
> ==============================================================
> ==========
> Lincoln D. Stein Cold Spring Harbor
> Laboratory
> lstein at cshl.org Cold Spring
> Harbor, NY
> ==============================================================
> ==========
>
>
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