[Bioperl-l] How to represent no alignment?

[Jason Stajich]

If you want an alignment with no sequences just don't add any:
my $aln = new Bio::SimpleAlign;

If you want to still add the sequences and not have them aligned at all
just add enough leading or trailing gaps I guess.

-jason
On Mon, 7 Jul 2003, Yee Man Chan wrote:

>
> Hi
>
> 	I am wondering how I can create a SimpleAlign object with no
> alignment. There are circumstances that my alignment module will return an
> empty alignment because the two sequences are just complete different.
>
> Thanks in advance.
> Yee Man
>
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at portal.open-bio.org
> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu