[Bioperl-l] bioperl-1.2.2 - Release Candidiate 2

Rob Edwards redwards at utmem.edu
Sun Jul 6 17:15:06 EDT 2003


I get one error with this rc:

t/BioGraphics: GD or Text::Shellwords modules are not installed. This means that Bio::Graphics module is unusable. Skipping tests.
both of these are installed, and the error message is wrong. In fact, the correct error is:
Can't locate Bio/Root/Version.pm in @INC

The two files are Bio/Graphics/Glyph.pm and Bio/Graphics/Glyph/Factory.pm, both have use Bio::Root::Version that can be commented out to get t/BioGraphics to run without error.

All other tests and whatnot pass just fine using perl 5.8.0

Rob






On Sun, Jul 06, 2003 at 11:14:58AM +0100, Heikki Lehvaslaiho wrote:
> bioperl-1.2.2 - Release Candidiate 2 is now available at
> 
>   http://bioperl.org/DIST/bioperl-1.2.2rc2.tar.gz
> 
> (This time the URL is correct)
> 
> Most important changes from RC1 are:
> 
> * Bio::OntologyIO::dagflat fixes 
> * fixes to GenBank entry web retrieval and parsing
> * Bio::Graphics and GFF fixes from head are now in
> 
> The more detailed change log is in the root directory file 'Changes'.
> 
> Unless we hear back from you, this will be released as official 1.2.2 in
> a few days time.
> 
> 	-Heikki
> 
> -- 
> ______ _/      _/_____________________________________________________
>       _/      _/                      http://www.ebi.ac.uk/mutations/
>      _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
>     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
>    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
>   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
>      _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
> ___ _/_/_/_/_/________________________________________________________
> 
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