[Bioperl-l] Sim4 output parsing using Bioperl

[Chris Mungall]

On Wed, 2 Jul 2003, Hilmar Lapp wrote:

>
> On Tuesday, July 1, 2003, at 01:53  PM, Jason Stajich wrote:
>
> > I have written SearchIO::sim4 which doesn't have this problem, but is
> > only
> > on the main trunk (checkout via CVS) but it returns Bio::Search objects
> > not Exons.
> >
>
> (Jason I didn't reply to all first)
>
> Would people be opposed to or have concerns with us desupporting
> Bio::Tools::Sim4 in favor of SearchIO::sim4?

does SearchIO::sim4 support the A=4 option?

> 	-hilmar
>
>