[Bioperl-l] circular refs/ unattach_seq in SeqFeatureI

[Jason Stajich]

I checked, Bio::Seq, does it correctly

  my $aseq = $self->primary_seq;
  $feat->attach_seq($aseq);


Mostly dettach_seq was for my sanity - I'll double check - may be all
related to Bio::Index::Fasta returning Bio::Seq objects and my needing to
call $seq->add_SeqFeature($f) instead of $f->attach_seq($seq) since $seq
isa Bio::Seq.

-j
--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu