[Bioperl-l] megablast parser

Jason Stajich jason@cgt.mc.duke.edu
Fri Jan 17 20:41:29 EST 2003

The oft requested megablast parser has now been implemented in SearchIO.

The main trunk and branch code will reflect this since it is minor changes
to blast.pm.  I've also implemented SearchIO/megablast.pm for the single
line 'format 0' form of megablast.  I expect to also fail over to the
blast.pm when someone provides a blast-like format megablast report to the
megablast driver.

Finishing up the changes on the branch and it will be available in


Jason Stajich
Duke University
jason at cgt.mc.duke.edu

More information about the Bioperl-l mailing list