[Bioperl-l] megablast parser

[Jason Stajich]

The oft requested megablast parser has now been implemented in SearchIO.

The main trunk and branch code will reflect this since it is minor changes
to blast.pm.  I've also implemented SearchIO/megablast.pm for the single
line 'format 0' form of megablast.  I expect to also fail over to the
blast.pm when someone provides a blast-like format megablast report to the
megablast driver.

Finishing up the changes on the branch and it will be available in
CVS.

-jason

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu