[Bioperl-l] SearchIO::hmmer - Missing last hit
James Wasmuth
james.wasmuth at ed.ac.uk
Mon Feb 24 13:50:16 EST 2003
Dear All,
I'm not sure whether this is a bug or a fault on my part.
I'm using SearchIO::hmmer, and keep getting the same error message when
parsing a HMMSearch output file.
Can't use an undefined value as an ARRAY reference at
/usr/local/lib/perl5/site_perl/5.8.0/Bio/SearchIO/hmmer.pm line 291,
<GEN1> line X.
where X is the line containing the header for the last hit.
I'm using the latest release of the module grabbed feom CVS but to no
avail. Any ideas?
Cheers
James
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