[Bioperl-l] StandAloneBlast returning Bio::SearchIO::blast was: where is Bio::Tools::Run::WrapperBase.pm?

[Ewan Birney]

Got it:

    my $output = Bio::SearchIO->new( -output_format => 'blast', -file =>
$filename);

    $output->write_result($blast);


s/blast/html/ in the output_format, and voila... html